{"id":"W2692314407","doi":"10.3389/fnagi.2017.00195","title":"16S rRNA Next Generation Sequencing Analysis Shows Bacteria in Alzheimer’s Post-Mortem Brain","year":2017,"lang":"en","type":"article","venue":"Frontiers in Aging Neuroscience","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":317,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Alzheimer Society; Medical Research Council; Alzheimer's Society","keywords":"Neuroinflammation; Biology; Pathology; Disease; Brain tissue; Amyloid (mycology); Central nervous system; Alzheimer's disease; Neuroscience; Medicine","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004579512,0.0001434637,0.0001995738,0.0002319248,0.0002818914,0.0002244894,0.000530278,0.00008733453,0.000004290014],"category_scores_gemma":[0.0001993733,0.0001518848,0.00006925237,0.0002390643,0.0001493625,0.00004092471,0.0001482442,0.0001395903,0.00000122561],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005687216,"about_ca_system_score_gemma":0.0001538031,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004006444,"about_ca_topic_score_gemma":0.001327352,"domain_scores_codex":[0.9985512,0.00009342853,0.000250428,0.0006124852,0.0001068322,0.0003856078],"domain_scores_gemma":[0.9991156,0.000004120049,0.0001573865,0.0006073088,0.00003343882,0.00008217715],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.000006751545,0.00001310886,0.1054549,0.00000388335,0.000007863806,0.00001348766,0.0001053841,0.0004311529,0.89179,0.000003716656,0.0008273603,0.001342344],"study_design_scores_gemma":[0.0006173576,0.0001393729,0.7800707,0.00002813976,0.00006914536,0.00001948871,0.0001995246,0.04652959,0.1687026,0.0000218067,0.003102364,0.0004998451],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.993086,0.0003199794,0.004504532,0.0007408598,0.001085587,0.0001434701,0.00001306149,0.000008179542,0.00009834924],"genre_scores_gemma":[0.9951446,0.00009250905,0.002616784,0.001837247,0.0001042174,0.00000727895,0.00003726209,0.00001172898,0.0001483429],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7230874,"threshold_uncertainty_score":0.6193683,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06200376917959787,"score_gpt":0.3055305839972041,"score_spread":0.2435268148176062,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}