{"id":"W2704936816","doi":"10.1089/aid.2017.0014","title":"Highly Human Immunodeficiency Virus-Exposed Seronegative Men Have Lower Mucosal Innate Immune Reactivity","year":2017,"lang":"en","type":"article","venue":"AIDS Research and Human Retroviruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Manitoba; Public Health Agency of Canada","funders":"National Center for Advancing Translational Sciences; National Institute of Diabetes and Digestive and Kidney Diseases; National Institute of Allergy and Infectious Diseases; National Institute of Mental Health; Canadian Institutes of Health Research; UCLA AIDS Institute; Center for AIDS Research, University of Washington; National Institutes of Health; AIDS Healthcare Foundation","keywords":"Immune system; Immunology; Innate immune system; Biology; Innate lymphoid cell; Inflammation; Intestinal mucosa; Cytokine; Immunohistochemistry; Medicine; Internal medicine","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","sts","insufficient_payload"],"consensus_categories":["sts","insufficient_payload"],"category_scores_codex":[0.002009832,0.0004177128,0.0006276734,0.000518936,0.006959986,0.0005677301,0.001168592,0.0003434821,0.0009170304],"category_scores_gemma":[0.0005823451,0.0003432235,0.0001595066,0.0001396224,0.003525304,0.0007299632,0.001161427,0.001517277,0.001234108],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000299488,"about_ca_system_score_gemma":0.0001913641,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01163223,"about_ca_topic_score_gemma":0.001164832,"domain_scores_codex":[0.995698,0.0007999273,0.0005139601,0.000897676,0.0003856125,0.001704835],"domain_scores_gemma":[0.9971313,0.0003637515,0.0002526963,0.001608053,0.0004579337,0.0001862404],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0007625411,0.001133705,0.08111657,0.0000363237,0.0004548872,0.0001451963,0.00075819,4.807776e-8,0.9018774,0.00659834,0.003181362,0.003935445],"study_design_scores_gemma":[0.004744378,0.007837308,0.597608,0.00008804925,0.00003644759,0.00002132957,0.0005692181,2.751377e-7,0.3709312,0.003684361,0.01400153,0.0004779429],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9713653,0.001876208,0.000004487039,0.0003262084,0.0001221298,0.0007018335,0.0002304664,0.00009412841,0.02527923],"genre_scores_gemma":[0.9770887,0.0004223889,0.0000280346,0.00001967726,0.00006902804,0.0001409803,0.000182401,0.00005063268,0.02199814],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5309462,"threshold_uncertainty_score":0.9999962,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.07220548420265802,"score_gpt":0.3665034413911988,"score_spread":0.2942979571885408,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}