{"id":"W2728376748","doi":"10.3389/fmicb.2017.01223","title":"Biphenyl Modulates the Expression and Function of Respiratory Oxidases in the Polychlorinated-Biphenyls Degrader Pseudomonas pseudoalcaligenes KF707","year":2017,"lang":"en","type":"article","venue":"Frontiers in Microbiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":7,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; Università di Bologna","keywords":"Biphenyl; Biochemistry; Pseudomonas; Oxidase test; Chemistry; Metabolite; Enzyme; Bacteria; Microbiology; Biology; Organic chemistry; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001167394,0.0004874464,0.0003304544,0.0003130468,0.0001394154,0.0003860233,0.0001888354,0.0003385233,0.0005526164],"category_scores_gemma":[0.0002643265,0.0001883575,0.0002432289,0.0003359828,0.0002007257,0.0001962014,0.0002500639,0.0003385811,0.0004350913],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003054473,"about_ca_system_score_gemma":0.0002132142,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003242858,"about_ca_topic_score_gemma":0.002428508,"domain_scores_codex":[0.9996333,0.00005640676,0.00003169799,0.00004536779,0.00014587,0.00008737325],"domain_scores_gemma":[0.9997328,0.00005308719,0.00007331603,0.00002535134,0.00006365933,0.00005185199],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003969522,0.00001615177,0.0001838868,0.00001020977,0.000001710545,0.0000217444,0.00001070862,0.00001154902,0.9994228,0.000007797341,0.00000741638,0.0002664334],"study_design_scores_gemma":[0.00000788512,0.0002485265,0.02701757,0.000005172787,0.00001863133,0.0003045228,0.0001553632,0.0006800829,0.9707977,0.00003494761,0.0007161646,0.00001354382],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9981371,0.0003478092,0.0005892073,0.0000667417,0.00001032818,0.00000704659,0.0003870168,0.00003698577,0.0004177055],"genre_scores_gemma":[0.9965883,0.000276773,0.0007624594,0.00004070688,0.000005317912,0.00001453381,0.0009293334,0.00002844266,0.001354165],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003242858,"threshold_uncertainty_score":0.006447971,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01562200367046537,"score_gpt":0.2320138007941629,"score_spread":0.2163917971236975,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}