{"id":"W2734074412","doi":"10.1111/mec.14221","title":"<i>Cis</i>‐regulatory evolution in a wild primate: Infection‐associated genetic variation drives differential expression of <i><scp>MHC</scp>‐<scp>DQA</scp>1</i> in vitro","year":2017,"lang":"en","type":"article","venue":"Molecular Ecology","topic":"Evolution and Genetic Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University","funders":"Fogarty International Center; Economic and Social Research Council; National Institute of Allergy and Infectious Diseases; Natural Sciences and Engineering Research Council of Canada; University of Oregon; National Science Foundation; National Institutes of Health; National Geographic Society","keywords":"Biology; Genetics; Balancing selection; SNP; Allele; Genetic variation; Population; Natural selection; Genetic architecture; Single-nucleotide polymorphism; Gene; Genotype; Quantitative trait locus","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001846699,0.000143186,0.0001519706,0.0002839713,0.0002038411,0.0002799666,0.0001829986,0.0001983636,0.0008310082],"category_scores_gemma":[0.0002360953,0.0001291788,0.0001361025,0.0002055007,0.0003440726,0.00009458186,0.0001813674,0.0003009387,0.0001528352],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002520572,"about_ca_system_score_gemma":0.0001026512,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009960467,"about_ca_topic_score_gemma":0.00268087,"domain_scores_codex":[0.9998345,0.00003966158,0.000007789833,0.00006899288,0.00002677734,0.00002219705],"domain_scores_gemma":[0.9998223,0.00005559172,0.00005689729,0.00002216002,0.00001618129,0.00002694138],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00007502156,0.0000135548,0.008731289,0.00002319255,0.00001135823,0.00009527035,0.0001454194,0.0001174103,0.9891994,0.0001555938,0.00002670248,0.001405764],"study_design_scores_gemma":[0.00004951349,0.0006986774,0.6844204,0.00004099191,0.0001113495,0.003331986,0.0009338871,0.006939239,0.2956606,0.0008857592,0.006881857,0.00004579625],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9987577,0.00009883047,0.0005930934,0.00002152781,0.000002575325,0.000004538209,0.0001223207,0.000009838017,0.0003894315],"genre_scores_gemma":[0.9985259,0.00008288891,0.000816439,0.00005586732,0.00000386177,0.00001440815,0.0002110748,0.00001328606,0.0002763865],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0009960467,"threshold_uncertainty_score":0.00278002,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.003348438435656764,"score_gpt":0.220951406248369,"score_spread":0.2176029678127122,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}