{"id":"W2734456025","doi":"10.1128/genomea.00333-17","title":"Complete Genome Sequence of Streptococcus pneumoniae Virulent Phage MS1","year":2017,"lang":"en","type":"article","venue":"Genome Announcements","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":10,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval; Centre hospitalier de l'Université Laval","funders":"Canadian Institutes of Health Research; Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs; Government of Canada","keywords":"Virulence; Biology; Streptococcus pneumoniae; Whole genome sequencing; Genome; Microbiology; Genetics; Sequence (biology); Virology; Bacteria; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002571337,0.001309887,0.001283836,0.002118615,0.0009319689,0.0008177901,0.0005078938,0.0007595392,0.005353448],"category_scores_gemma":[0.0006475031,0.0004511306,0.0008471116,0.003239091,0.0002995672,0.0003404717,0.0004279053,0.001107965,0.00509108],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0007700906,"about_ca_system_score_gemma":0.002169128,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.010986,"about_ca_topic_score_gemma":0.006761016,"domain_scores_codex":[0.999736,0.00002613255,0.00002762449,0.00007036717,0.00008891089,0.00005095371],"domain_scores_gemma":[0.999535,0.0001009546,0.00008027659,0.00003210765,0.0001361212,0.0001155736],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00260676,0.0001784294,0.004167057,0.002226013,0.00007304365,0.0008026359,0.0006948725,0.001116721,0.9506297,0.0005883142,0.007300396,0.029616],"study_design_scores_gemma":[0.000549598,0.001405399,0.3959107,0.0008502385,0.0008241738,0.002960568,0.0009605437,0.004230421,0.223291,0.001261652,0.3674075,0.000348307],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"dataset","genre_gemma":"empirical","genre_scores_codex":[0.3994225,0.008119943,0.01319087,0.0007336579,0.0002936062,0.0004822802,0.5666921,0.001114912,0.009950147],"genre_scores_gemma":[0.1625464,0.003771339,0.01395483,0.0002006088,0.0001003835,0.000252526,0.8124622,0.000364566,0.006347067],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.010986,"threshold_uncertainty_score":0.02184409,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04443988808574406,"score_gpt":0.2904227471094796,"score_spread":0.2459828590237355,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}