{"id":"W2735576355","doi":"10.1073/pnas.1703088114","title":"Insights into the red algae and eukaryotic evolution from the genome of <i>Porphyra umbilicalis</i> (Bangiophyceae, Rhodophyta)","year":2017,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Marine and coastal plant biology","field":"Earth and Planetary Sciences","cited_by":310,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"National Institute of General Medical Sciences; Biotechnology and Biological Sciences Research Council; Agence Nationale de la Recherche; Natural Environment Research Council; Sight Research UK","keywords":"Porphyra; Biology; Red algae; Algae; Multicellular organism; Botany; Cytoskeleton; Chlamydomonas; Cell biology; Genetics; Gene; Cell","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005997122,0.00008450415,0.0001444567,0.00004080924,0.0006521881,0.00004672253,0.001325697,0.00006726722,0.0000397441],"category_scores_gemma":[0.0004020038,0.00003745491,0.00005739901,0.0002043739,0.001901122,0.0003696342,0.0001583076,0.0001382151,0.000002085515],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000003013052,"about_ca_system_score_gemma":0.00002807047,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002870583,"about_ca_topic_score_gemma":0.00006931595,"domain_scores_codex":[0.99884,0.00001733703,0.0002522066,0.0002084305,0.0005664051,0.0001155683],"domain_scores_gemma":[0.9989479,0.0003568601,0.0005209397,0.00002772784,0.000117882,0.00002864335],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001443917,0.00003944226,0.8200603,0.00006952714,0.00007678884,4.940764e-8,0.001381018,0.0001472852,0.1268138,0.03349828,0.0009196496,0.01684941],"study_design_scores_gemma":[0.0000858692,0.00004743727,0.8832076,0.00002140743,0.0000112784,0.000002953202,0.000141714,0.001174718,0.004227094,0.1105534,0.0004772211,0.00004929792],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9808865,0.0006887398,7.350208e-7,0.004982634,0.00003682167,0.0001441114,0.00004627078,0.00000390902,0.01321031],"genre_scores_gemma":[0.9992059,0.0001221063,0.000174132,0.000269159,0.0001157085,0.000001105746,0.000001288451,9.483305e-7,0.0001096094],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1225867,"threshold_uncertainty_score":0.7004765,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02612936014382125,"score_gpt":0.2368318079615268,"score_spread":0.2107024478177056,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}