{"id":"W2737124251","doi":"10.1371/journal.ppat.1006460","title":"Digoxin reveals a functional connection between HIV-1 integration preference and T-cell activation","year":2017,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":30,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University Health Centre; Université de Montréal","funders":"European Commission; Canadian Institutes of Health Research; McGill University Health Centre; Wellcome Trust; McGill University; National Institute of Neurological Disorders and Stroke; Medical Research Council; Wellcome","keywords":"Digoxin; Biology; Gene; CD81; Gene expression; Virus; Cell biology; Virology; Biochemistry; Medicine; Internal medicine","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001157653,0.0001061703,0.0001363198,0.00005909368,0.000579433,0.00005231268,0.00008112853,0.0001286457,0.0002276687],"category_scores_gemma":[0.0002097015,0.00008712172,0.00003110521,0.00002364243,0.0001003827,0.0001848501,0.00005344686,0.0001604875,0.0007345484],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000435161,"about_ca_system_score_gemma":0.0000318087,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003209928,"about_ca_topic_score_gemma":0.00001368544,"domain_scores_codex":[0.9993034,0.000101138,0.0001251952,0.000238438,0.00004429818,0.0001875544],"domain_scores_gemma":[0.9994193,0.0001089966,0.0001100715,0.0002528572,0.00007738604,0.00003135509],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00007138596,0.0001090939,0.1127049,0.00001181405,0.00007632331,0.000001493955,0.000134002,2.466517e-7,0.8768522,0.0001652233,0.0007783191,0.009095044],"study_design_scores_gemma":[0.001108763,0.0002081896,0.6472345,0.00003966524,0.00004893723,0.000004924165,0.00007640163,0.000005876232,0.3498072,0.0003929977,0.0009644617,0.0001081158],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9950997,0.00008781526,0.001274912,0.000371091,0.00007582728,0.0002743983,0.0002506061,0.00003758589,0.002528085],"genre_scores_gemma":[0.9957301,0.00004329718,0.00009200478,0.00001476201,0.00005550637,0.00006273618,0.0009140307,0.000007887233,0.003079651],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5345296,"threshold_uncertainty_score":0.9441378,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.07342647167564197,"score_gpt":0.2652648958950934,"score_spread":0.1918384242194515,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}