{"id":"W2737213693","doi":"10.3389/fcimb.2017.00335","title":"What the SIF Is Happening—The Role of Intracellular Salmonella-Induced Filaments","year":2017,"lang":"en","type":"review","venue":"Frontiers in Cellular and Infection Microbiology","topic":"Cellular transport and secretion","field":"Biochemistry, Genetics and Molecular Biology","cited_by":71,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; Michael Smith Health Research BC; University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Salmonella; Salmonella enterica; Intracellular; Vacuole; Biogenesis; Endosome; Secretion; Biology; Cell biology; Microbiology; Effector; Intracellular parasite; Type three secretion system; Pathogenicity island; Pathogen; Cytoplasm; Bacteria; Virulence; Genetics; Gene; Biochemistry","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005644733,0.0004226796,0.0009148925,0.0001396657,0.0002588642,0.00008333365,0.0004332275,0.0008704645,0.00003774385],"category_scores_gemma":[0.00002133164,0.0002799708,0.0004530602,0.0001096414,0.0003934513,0.00001602372,0.0001437963,0.0004782422,0.000008040392],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003190108,"about_ca_system_score_gemma":0.0001039783,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001162974,"about_ca_topic_score_gemma":0.00002991967,"domain_scores_codex":[0.9980521,0.0003212275,0.0006384848,0.000584174,0.0000655601,0.0003385197],"domain_scores_gemma":[0.9985128,0.00001988345,0.0005829107,0.0007799449,0.00005665925,0.00004781021],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00005320583,0.000102008,0.001292147,0.001108809,0.0005342443,0.000006599079,0.0002666992,0.000001407935,0.2749908,0.00002461261,0.000956949,0.7206625],"study_design_scores_gemma":[0.0002716419,0.0001352457,0.0000145183,0.0005147049,0.0002886838,0.00005512256,0.00008752982,0.00001404418,0.02015838,0.00008030213,0.9780914,0.0002884548],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.006738681,0.9890137,0.001164603,0.00004022646,0.002077059,0.00076155,0.00003421357,0.000006669352,0.0001633095],"genre_scores_gemma":[0.004656646,0.9917507,0.00005000491,0.00004610794,0.0002759225,0.00004895038,0.00265263,0.00004431294,0.0004747698],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9771344,"threshold_uncertainty_score":0.9999653,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0188580960388485,"score_gpt":0.2641445128270274,"score_spread":0.2452864167881789,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}