{"id":"W2738490348","doi":"10.1139/gen-2017-0059","title":"Genome-wide identification, functional prediction, and evolutionary analysis of the R2R3-MYB superfamily in <i>Brassica napus</i>","year":2017,"lang":"en","type":"article","venue":"Genome","topic":"Plant Gene Expression Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":72,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"MYB; Biology; Synteny; Genetics; Gene; Genome; Brassica rapa; Transcription factor; Computational biology","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002657935,0.0001194314,0.0001942935,0.0001710572,0.000315312,0.0000400469,0.0003969825,0.0001099095,0.00006043303],"category_scores_gemma":[0.0001741303,0.00009898605,0.0001562503,0.000259485,0.0001883713,0.00001281286,0.0002604184,0.00007907387,0.000005697753],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000250422,"about_ca_system_score_gemma":0.0000791499,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004268047,"about_ca_topic_score_gemma":0.0001553388,"domain_scores_codex":[0.9988346,0.00007383584,0.0003376071,0.0003838386,0.00021344,0.0001567481],"domain_scores_gemma":[0.9986776,0.00001696082,0.0002318449,0.0008886828,0.0001261349,0.00005881434],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00002147559,0.00003209839,0.2766107,0.00000428332,0.000321921,4.695249e-7,0.00002915855,0.001454161,0.7204844,0.000009432441,0.00100864,0.00002330856],"study_design_scores_gemma":[0.0002212985,0.00001331261,0.9724376,0.000003675151,0.0002550649,0.000002920701,0.00004347224,0.0002458761,0.01109862,0.00005427487,0.01552786,0.0000960943],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9970206,0.0006968734,0.0006318345,0.0004210683,0.0001219382,0.0001122469,0.0003290024,0.000005548081,0.0006609027],"genre_scores_gemma":[0.9967005,0.000335147,0.00006654413,0.000132696,0.00008761664,0.00002085444,0.000562861,0.00000933921,0.002084407],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7093858,"threshold_uncertainty_score":0.4036534,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008811957783404543,"score_gpt":0.2143355238531378,"score_spread":0.2055235660697332,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}