{"id":"W2739049790","doi":"10.1038/s41598-017-06675-1","title":"Richer gut microbiota with distinct metabolic profile in HIV infected Elite Controllers","year":2017,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":98,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"European Regional Development Fund; Instituto de Salud Carlos III; University of Victoria; Svenska Läkaresällskapet; Vetenskapsrådet; Ministerio de Economía y Competitividad; Styrelsen för Internationellt Utvecklingssamarbete","keywords":"Gut flora; Elite; Human immunodeficiency virus (HIV); Biology; Computational biology; Immunology","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001341175,0.0002013345,0.0002451436,0.0004944687,0.0003797011,0.0006506575,0.00008365368,0.0002098005,0.001481762],"category_scores_gemma":[0.0004522302,0.00008828886,0.00009896918,0.0002597827,0.0001558318,0.0002510723,0.000358869,0.0002114488,0.00007453511],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001013545,"about_ca_system_score_gemma":0.00007770472,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006599866,"about_ca_topic_score_gemma":0.0008806142,"domain_scores_codex":[0.9999202,0.00001275324,0.000007843266,0.00002372551,0.00001451858,0.0000208952],"domain_scores_gemma":[0.9998379,0.00002711284,0.00005057213,0.00001158081,0.0000176663,0.00005522407],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.002457571,0.0002791955,0.862165,0.0000970641,0.0001164704,0.001713257,0.0008434487,0.0001953626,0.09590747,0.0001314802,0.000215301,0.03587828],"study_design_scores_gemma":[0.00001832866,0.0006304684,0.9935424,0.00001738063,0.0000598541,0.001887845,0.0006710137,0.0002814093,0.002198927,0.0001064793,0.000577389,0.000008515412],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.999516,0.0001773279,0.00004227021,0.000007300667,0.000001632034,0.000003177475,0.00004902841,0.00000152363,0.000201773],"genre_scores_gemma":[0.9995142,0.00008983259,0.00009691781,0.00001946676,0.000004977493,0.00000286357,0.00008089796,0.000001153764,0.0001897166],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001481762,"threshold_uncertainty_score":0.00495702,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007671957552555485,"score_gpt":0.2527414638035247,"score_spread":0.2450695062509692,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}