{"id":"W2739298907","doi":"10.1016/j.tig.2017.06.008","title":"Clinical Genomics in Inflammatory Bowel Disease","year":2017,"lang":"en","type":"review","venue":"Trends in Genetics","topic":"Inflammatory Bowel Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":146,"is_retracted":false,"has_abstract":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Biology; Inflammatory bowel disease; Genomics; Disease; Inflammatory Bowel Diseases; Computational biology; Genome; Genetics; Bioinformatics; Internal medicine; Gene; Medicine","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0007303102,0.0006763433,0.001070752,0.000439569,0.00006975701,0.00008252868,0.00124265,0.000933624,0.00004560123],"category_scores_gemma":[0.0002171526,0.0007015356,0.0008175736,0.0001011057,0.0002969917,0.00000454678,0.0006301468,0.0006110579,0.00009146109],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001270313,"about_ca_system_score_gemma":0.001116906,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000002607325,"about_ca_topic_score_gemma":0.0002139632,"domain_scores_codex":[0.9960906,0.0004753287,0.001555337,0.001042729,0.0002181705,0.0006178657],"domain_scores_gemma":[0.9965822,0.00003075518,0.0006378794,0.002283094,0.0000458019,0.0004203151],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0000917655,0.000171539,0.0286047,0.002431384,0.00008916604,0.001022812,0.00001233294,0.00006257723,0.000001065392,0.00002343377,0.001270815,0.9662184],"study_design_scores_gemma":[0.0006561641,0.00003620081,0.07455835,0.001195788,0.000222534,0.000005853567,0.000002489733,0.00004084807,5.576213e-7,0.00002771648,0.9225494,0.0007041458],"study_design_candidate":"design_other","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.008583585,0.9886206,0.000003893032,0.000008537116,0.000690055,0.0004631043,0.0002058525,0.00001595549,0.001408395],"genre_scores_gemma":[0.0004354224,0.9953294,0.0002402466,0.0000532389,0.0009269405,0.0001575295,0.0009322556,0.0001556875,0.001769309],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9655142,"threshold_uncertainty_score":0.9995436,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.07543415262815277,"score_gpt":0.4019596441704634,"score_spread":0.3265254915423106,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}