{"id":"W2741737803","doi":"10.1002/ece3.3049","title":"Escaping introns in <scp>COI</scp> through <scp>cDNA</scp> barcoding of mushrooms: <i>Pleurotus</i> as a test case","year":2017,"lang":"en","type":"article","venue":"Ecology and Evolution","topic":"Fungal Biology and Applications","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"Institut Pengurusan dan Pemantauan Penyelidikan, Universiti Malaya; Medical Research Council; Canada First Research Excellence Fund; Ministry of Higher Education, Malaysia; Ministry of Education, India; Universiti Malaya","keywords":"DNA barcoding; Biology; Complementary DNA; Genetics; Mitochondrial DNA; Intron; Oyster; Cytochrome c oxidase subunit I; Gene; Sequence analysis; Pleurotus; Expressed sequence tag; Barcode; Mushroom; Evolutionary biology; Botany; Ecology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002900765,0.0002608815,0.0001956042,0.0003924621,0.0002239634,0.00036118,0.0002453454,0.0003057439,0.0004842354],"category_scores_gemma":[0.0007603636,0.0001177924,0.0002446113,0.0003539955,0.0003998924,0.0002409551,0.0002762029,0.0004107456,0.0002867297],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002068167,"about_ca_system_score_gemma":0.0001721233,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007730958,"about_ca_topic_score_gemma":0.001190974,"domain_scores_codex":[0.9997873,0.0000311482,0.00002036987,0.00008186456,0.00005368926,0.00002567602],"domain_scores_gemma":[0.9991948,0.0002621301,0.0002666446,0.0001043745,0.0001237713,0.00004820453],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003968081,0.00001167821,0.003814112,0.00004528761,0.000006403437,0.0001618494,0.00009818856,0.0001106219,0.9920776,0.0001101398,0.00001847821,0.003505909],"study_design_scores_gemma":[0.000007096341,0.0002495304,0.08090276,0.00003642098,0.00005280405,0.0013066,0.0003011013,0.003491103,0.9094439,0.0002049475,0.003989877,0.00001406255],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9869912,0.0002038937,0.01149371,0.00007223639,0.000009703496,0.00003048884,0.0003238287,0.00006700784,0.0008079413],"genre_scores_gemma":[0.9858786,0.0001246085,0.01269324,0.00008358691,0.000006903336,0.00003187525,0.0007487415,0.00002914335,0.0004030999],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0007730958,"threshold_uncertainty_score":0.001619875,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01865344509852767,"score_gpt":0.2825525914232561,"score_spread":0.2638991463247284,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}