{"id":"W2742897102","doi":"10.1111/jfd.12670","title":"Overview of infectious salmon anaemia virus (<scp>ISAV</scp>) in Atlantic Canada and first report of an <scp>ISAV</scp> North American‐<scp>HPR</scp>0 subtype","year":2017,"lang":"en","type":"article","venue":"Journal of Fish Diseases","topic":"Aquaculture disease management and microbiota","field":"Immunology and Microbiology","cited_by":28,"is_retracted":false,"has_abstract":true,"ca_institutions":"Fisheries and Oceans Canada","funders":"Fisheries and Oceans Canada; Canadian Food Inspection Agency","keywords":"Nova scotia; Culling; Outbreak; Biology; Notifiable disease; Genotype; Virology; Fishery; Animal health; Phylogenetic tree; Geography; Disease; Ecology; Genetics; Archaeology; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000320204,0.0004648842,0.001221741,0.0003227983,0.0003304173,0.00008413249,0.0007438242,0.0001800846,0.00002235274],"category_scores_gemma":[0.002473448,0.0004081253,0.0003222489,0.0003294124,0.0006127668,0.0005089979,0.0002769097,0.0004619281,0.000007058547],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001532919,"about_ca_system_score_gemma":0.0005716707,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.1104584,"about_ca_topic_score_gemma":0.4603675,"domain_scores_codex":[0.9972171,0.0002293247,0.001228966,0.0004703594,0.0002221872,0.0006321094],"domain_scores_gemma":[0.9950854,0.0005184044,0.003020262,0.0007818119,0.0003377465,0.0002563444],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00004949476,0.0006356697,0.8884453,0.0004289958,0.0007006393,0.001208518,0.0003244769,0.00002531724,0.004661256,0.00002098964,0.1025832,0.0009162129],"study_design_scores_gemma":[0.001750024,0.0004345166,0.919038,0.0003000949,0.000733789,0.0003826898,0.0006634216,0.000002662521,0.002641791,0.00003798374,0.07392675,0.00008827724],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9917514,0.005769224,0.000003729255,0.00008516712,0.0006708929,0.0003350388,0.0004507531,0.0000221208,0.0009117179],"genre_scores_gemma":[0.994947,0.003219954,0.00001762884,0.0003340457,0.0001298919,0.000007507911,0.0002773673,0.00004240576,0.001024186],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3499091,"threshold_uncertainty_score":0.999837,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01112321135591015,"score_gpt":0.2418730555145998,"score_spread":0.2307498441586896,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}