{"id":"W2744757514","doi":"10.1136/sextrans-2017-053264.32","title":"O06.3 Analysis of the<i>treponema pallidum</i>proteome for evidence of host protein mimicry; identification of a mechanism for bacterial persistence and establishment of latency during syphilis infection?","year":2017,"lang":"en","type":"article","venue":"","topic":"Syphilis Diagnosis and Treatment","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Victoria","funders":"","keywords":"Treponema; Biology; Proteome; Syphilis; Computational biology; Microbiology; Virology; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001751408,0.000268657,0.0001743429,0.000177218,0.0001648977,0.0002781161,0.0001919833,0.0003156601,0.001505877],"category_scores_gemma":[0.000340159,0.00008396881,0.0003681477,0.0003347624,0.0001430443,0.0001728052,0.0001557973,0.0002235798,0.0006247179],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001613374,"about_ca_system_score_gemma":0.0001967848,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00129136,"about_ca_topic_score_gemma":0.0009744982,"domain_scores_codex":[0.9999284,0.00000885396,0.000005413975,0.000016174,0.00002295148,0.00001824075],"domain_scores_gemma":[0.999854,0.00003544213,0.00004316168,0.00001618912,0.00002205983,0.00002913156],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003329138,0.00004467583,0.007987589,0.0001215052,0.00001743448,0.000263789,0.00009075948,0.0002748085,0.9876121,0.0001162144,0.0002552107,0.002882936],"study_design_scores_gemma":[0.00003150283,0.0005541302,0.201585,0.00003678901,0.00006710413,0.002669032,0.000347568,0.01394716,0.7723581,0.0002904844,0.008084927,0.0000282059],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9942595,0.0002491331,0.002440424,0.0000597338,0.00001097674,0.00001407979,0.001936132,0.00009169064,0.0009383534],"genre_scores_gemma":[0.9823187,0.0002612777,0.00861347,0.00007808979,0.00000575104,0.00002035598,0.007609053,0.00008705116,0.001006259],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001505877,"threshold_uncertainty_score":0.005037665,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04409328362192368,"score_gpt":0.3026382849221108,"score_spread":0.2585450013001871,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}