{"id":"W2747164541","doi":"10.1093/ofid/ofx163.1568","title":"Retrospective Evaluation of Accelerate Pheno™ System (AXDX, Version 1.1) for Identification/Antimicrobial Susceptibility Testing (ID/AST) of Gram-Negative Bacilli (GNB) including Carbapenemase-Producing Organisms (CPO) from Seeded Blood Culture Bottles (SBCB) Tested using AXDX PhenoTestTM BC Kits","year":2017,"lang":"en","type":"article","venue":"Open Forum Infectious Diseases","topic":"Bacterial Identification and Susceptibility Testing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Sinai Health System; University Health Network; University of Manitoba; Mount Sinai Hospital","funders":"","keywords":"Proteus mirabilis; Microbiology; Enterobacter cloacae; Amikacin; Ertapenem; Meropenem; Medicine; Bacteremia; Broth microdilution; Piperacillin; Klebsiella pneumoniae; Ceftazidime; Tazobactam; Ceftriaxone; Antimicrobial; Biology; Imipenem; Pseudomonas aeruginosa; Escherichia coli; Antibiotics; Minimum inhibitory concentration; Bacteria; Antibiotic resistance","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaresearch","metaepi_narrow","sts"],"consensus_categories":[],"category_scores_codex":[0.001285121,0.0003731341,0.000596246,0.00008477516,0.001496055,0.0005818856,0.0007393922,0.0002270172,0.00004271369],"category_scores_gemma":[0.008556472,0.0003882348,0.0001857856,0.0002392844,0.000263177,0.0001590846,0.0006829999,0.000125892,0.00000402618],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002904376,"about_ca_system_score_gemma":0.0004837575,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00502929,"about_ca_topic_score_gemma":0.0008734096,"domain_scores_codex":[0.9968203,0.0003264458,0.0009659422,0.00112091,0.0003999454,0.0003664358],"domain_scores_gemma":[0.9937661,0.0001311378,0.001933015,0.001268999,0.002768794,0.0001319307],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001451937,0.0002981955,0.2611252,0.0001793123,0.0001778401,3.537376e-7,0.0003225104,0.000479747,0.7368625,0.00003341671,0.00007187411,0.0003037616],"study_design_scores_gemma":[0.003322462,0.0003411443,0.2476886,0.0005125044,0.001106838,0.000005343548,0.00147486,0.004634383,0.7395781,0.0008102405,0.000006593088,0.0005190077],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9946864,0.0000532999,0.0006251463,0.00003525586,0.0005520398,0.002292996,0.001307485,0.00005750543,0.0003899341],"genre_scores_gemma":[0.9967142,0.000005923305,0.001695708,0.00002191765,0.0002175927,0.0000803716,0.001172302,0.0000589237,0.00003305153],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01343667,"threshold_uncertainty_score":0.9998569,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0625110148276119,"score_gpt":0.3286497484635413,"score_spread":0.2661387336359294,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}