{"id":"W2747392928","doi":"10.3897/tdwgproceedings.1.20608","title":"SeqDB: Biological Collection Management with Integrated DNA Sequence Tracking ","year":2017,"lang":"en","type":"article","venue":"Biodiversity Information Science and Standards","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Barcode; Metadata; Workflow; Context (archaeology); Computer science; Metagenomics; DNA sequencing; Identification (biology); World Wide Web; Information retrieval; Database; Data science; Biology; Archaeology; Geography; Ecology; DNA","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.01154974,0.002845685,0.002381811,0.007756891,0.001871134,0.007495323,0.006851707,0.001732102,0.05887352],"category_scores_gemma":[0.01534453,0.002624796,0.002015254,0.006778208,0.001073942,0.005779789,0.007798466,0.00346856,0.05478577],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.002517278,"about_ca_system_score_gemma":0.004630129,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01149608,"about_ca_topic_score_gemma":0.007537535,"domain_scores_codex":[0.9938326,0.0006638037,0.001002854,0.001881895,0.002185812,0.0004329264],"domain_scores_gemma":[0.9911723,0.001695893,0.001028959,0.002804441,0.002280144,0.001018331],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.001153874,0.0002616609,0.005681312,0.001814363,0.0002813011,0.0003888929,0.0007510375,0.00303402,0.01181805,0.008998918,0.8585994,0.1072172],"study_design_scores_gemma":[0.0004207688,0.00009994479,0.006704559,0.0004607648,0.0001295042,0.000329862,0.0003246887,0.02424999,0.02953408,0.0168511,0.920575,0.0003197971],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"software","genre_gemma":"software","genre_scores_codex":[0.002772439,0.0007059329,0.2078732,0.0008019115,0.0007604379,0.001505906,0.2709537,0.4975685,0.01705815],"genre_scores_gemma":[0.01898864,0.001258572,0.2322656,0.002544367,0.0003168685,0.003942302,0.6662782,0.05811439,0.01629105],"genre_candidate":"software","genre_consensus":"software","teacher_disagreement_score":0.05887352,"threshold_uncertainty_score":0.1969516,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03140464749012388,"score_gpt":0.2659375320943499,"score_spread":0.2345328846042261,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}