{"id":"W2748457533","doi":"10.1016/j.dsr2.2017.08.007","title":"Gene transcription patterns in response to low level petroleum contaminants in Mytilus trossulus from field sites and harbors in southcentral Alaska","year":2017,"lang":"en","type":"article","venue":"Deep Sea Research Part II Topical Studies in Oceanography","topic":"Ocean Acidification Effects and Responses","field":"Earth and Planetary Sciences","cited_by":9,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"U.S. Geological Survey; Western University; U.S. Navy; Exxon Valdez Oil Spill Trustee Council; Western Ecological Research Center, U.S. Geological Survey; Ohio Arts Council; Exxon Mobil Corporation","keywords":"Mytilus; Mussel; Petroleum; Intertidal zone; Contamination; Environmental science; Sentinel species; Oil spill; Biology; Fishery; Environmental chemistry; Ecology; Environmental engineering; Chemistry","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001776675,0.0001957432,0.000404356,0.0007490529,0.0003862689,0.0001308764,0.0004058621,0.0001361397,0.00007881888],"category_scores_gemma":[0.001334643,0.0001609757,0.00006473291,0.0004252263,0.0003849571,0.0002265634,0.0001040291,0.0005128768,0.00001051105],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003216989,"about_ca_system_score_gemma":0.00003497343,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002092253,"about_ca_topic_score_gemma":0.06407817,"domain_scores_codex":[0.9968509,0.0009026661,0.0004350928,0.0005577399,0.0004694821,0.0007841148],"domain_scores_gemma":[0.9980211,0.001331517,0.00005353869,0.0003509201,0.00005043415,0.000192544],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.002511198,0.0001189283,0.9836382,0.00003563382,0.00001778095,0.0002389912,0.003559484,0.00009173567,0.000174676,0.000003971615,0.00007625658,0.009533205],"study_design_scores_gemma":[0.001601392,0.0005279559,0.9932182,0.0001871542,0.000002726214,0.000001205112,0.001825676,0.001394467,0.0005035364,0.0001401939,0.0004089943,0.000188486],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9943311,0.001658769,0.00001267051,0.003064787,0.0002197942,0.0004888461,0.000163295,0.00001054495,0.00005015799],"genre_scores_gemma":[0.9982734,0.001312817,0.00008237085,0.0001490561,0.00007525195,0.00001686037,0.00002298387,0.000005253486,0.00006194648],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.06198592,"threshold_uncertainty_score":0.9529999,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1015071083362906,"score_gpt":0.351966197863998,"score_spread":0.2504590895277073,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}