{"id":"W2748570664","doi":"10.1371/journal.pone.0183410","title":"snoRNA and piRNA expression levels modified by tobacco use in women with lung adenocarcinoma","year":2017,"lang":"en","type":"article","venue":"PLoS ONE","topic":"RNA modifications and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":27,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Fundação Carlos Chagas Filho de Amparo à Pesquisa do Estado do Rio de Janeiro; Conselho Nacional de Desenvolvimento Científico e Tecnológico; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior; Canada's Michael Smith Genome Sciences Centre; Johns Hopkins University; University of Pittsburgh; Fundação de Amparo à Pesquisa do Estado de São Paulo; Purdue University","keywords":"Small nucleolar RNA; Lung cancer; Adenocarcinoma; Piwi-interacting RNA; microRNA; Long non-coding RNA; Biology; RNA; Lung; Gene; Cancer; Bioinformatics; Oncology; Cancer research; Genetics; Medicine; Internal medicine; RNA interference","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005990332,0.00009364133,0.0001120788,0.00001783115,0.0001253774,0.00008874286,0.0001585678,0.00007701244,0.00001503275],"category_scores_gemma":[0.00003234385,0.00007997989,0.000008865621,0.00001696854,0.00006093042,0.00001597099,0.00008097834,0.00006225226,0.000001327271],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002085539,"about_ca_system_score_gemma":0.00002658249,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00006207172,"about_ca_topic_score_gemma":0.0000249503,"domain_scores_codex":[0.9993563,0.00001776614,0.00009551268,0.0002618362,0.00009757977,0.0001710407],"domain_scores_gemma":[0.9993142,0.00000438485,0.00007560752,0.000498127,0.00003733364,0.00007027473],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001562543,0.0001698147,0.08025702,0.00001394749,0.00003523631,0.000001733052,0.00006780156,0.000003444146,0.9184329,0.000007831886,0.0003302347,0.0005237967],"study_design_scores_gemma":[0.001038538,0.0001500989,0.4294358,0.00009383576,0.00001571475,0.000001253566,0.00005030745,0.00009583885,0.5686484,0.00001890594,0.0002638426,0.0001874255],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9985729,0.0006655089,0.0001232638,0.0001397919,0.000008001699,0.0001503028,0.00003281436,0.000004945323,0.0003024868],"genre_scores_gemma":[0.9979523,0.0002262664,0.0005631487,0.00008052604,0.00004623359,0.00008702531,0.00001527491,0.00001489177,0.001014275],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3497845,"threshold_uncertainty_score":0.3261485,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0461608683598238,"score_gpt":0.2425450917544725,"score_spread":0.1963842233946487,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}