{"id":"W2749300808","doi":"10.1093/ofid/ofx163.1485","title":"Decrease in PCV13 Serotypes in Adults Hospitalized with Pneumococcal Pneumonia Over Time: Evidence of Herd Immunity Effects from Childhood Vaccination","year":2017,"lang":"en","type":"article","venue":"Open Forum Infectious Diseases","topic":"Pneumonia and Respiratory Infections","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University; Université de Sherbrooke; McMaster University; Saint John Regional Hospital; Mount Sinai Hospital; University of British Columbia; Ottawa Hospital; Izaak Walton Killam Health Centre; Centre hospitalier universitaire de Québec; Nova Scotia Health Authority; Dalhousie University","funders":"Sanofi Pasteur; Public Health Agency of Canada; Canadian Institutes of Health Research; Regeneron Pharmaceuticals; Public Health Agency; Sanofi; AstraZeneca; Cleveland Clinic; Pfizer","keywords":"Herd immunity; Medicine; Serotype; Streptococcus pneumoniae; Pneumococcal disease; Vaccination; Pneumococcal pneumonia; Pneumonia; Pneumococcal conjugate vaccine; Sputum; Immunity; Immunization; Community-acquired pneumonia; Herd; Immunology; Pediatrics; Internal medicine; Antigen; Microbiology; Immune system; Antibiotics; Biology; Veterinary medicine; Tuberculosis","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006527313,0.0002478118,0.0003412916,0.0008098878,0.0005268011,0.0005764642,0.0007677609,0.0004813901,0.001104033],"category_scores_gemma":[0.003182942,0.0002180174,0.0005315071,0.001627739,0.0003693438,0.0005177838,0.0004643228,0.0006465563,0.0001605891],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00361603,"about_ca_system_score_gemma":0.004529797,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.7599915,"about_ca_topic_score_gemma":0.7837921,"domain_scores_codex":[0.9993285,0.00004796197,0.00005668806,0.0001347408,0.0002052664,0.0002268063],"domain_scores_gemma":[0.9984395,0.00009679365,0.0005547263,0.00006321965,0.000545245,0.0003004723],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00004327948,0.00001500486,0.9965609,0.00001885045,0.00003961769,0.00001869199,0.0001513366,0.00003618457,0.00007476968,0.00001395099,0.0002399416,0.002787411],"study_design_scores_gemma":[7.286178e-7,0.00001579763,0.9997138,0.000006058583,0.000008711066,0.00001485889,0.00007017863,0.00003867388,0.00001577417,0.000002879959,0.0001114854,9.732389e-7],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9934654,0.001668914,0.0001189362,0.0003523107,0.00001386027,0.00002455764,0.002476456,0.00001488295,0.001864718],"genre_scores_gemma":[0.998238,0.0005117505,0.00008724746,0.0001058119,0.00001107571,0.000007156158,0.0008375185,0.000001914765,0.0001996212],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7599915,"threshold_uncertainty_score":0.4828439,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007130770438512256,"score_gpt":0.2854931354059027,"score_spread":0.2783623649673904,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}