{"id":"W2749645151","doi":"10.1111/liv.13554","title":"Clonal characteristics of paired infiltrating and circulating B lymphocyte repertoire in patients with primary biliary cholangitis","year":2017,"lang":"en","type":"article","venue":"Liver International","topic":"Liver Diseases and Immunity","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University","funders":"","keywords":"Repertoire; Biology; Immunology; clone (Java method); IGHV@; Pathogenesis; Lymphocyte; B cell; Infiltration (HVAC); Lymphocytic infiltration; Gene; Antibody; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002565856,0.00027967,0.0002586349,0.001256131,0.0003677301,0.0003154922,0.0001687567,0.0003673541,0.001898213],"category_scores_gemma":[0.001347854,0.0001533976,0.0001112889,0.0005752907,0.0002703606,0.0002920236,0.0002560682,0.0002532225,0.0002205893],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001440427,"about_ca_system_score_gemma":0.0001050286,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004926015,"about_ca_topic_score_gemma":0.000552697,"domain_scores_codex":[0.9997903,0.00004335104,0.00002521663,0.00005659706,0.00004440749,0.00004005681],"domain_scores_gemma":[0.9993358,0.0002498719,0.0001649572,0.00004202297,0.00007498924,0.0001323329],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0003004725,0.00003113354,0.9834707,0.00002136618,0.00001557558,0.003127021,0.0002706021,0.00008955165,0.008037317,0.00002780988,0.00008031906,0.004528138],"study_design_scores_gemma":[0.00001438662,0.0002478845,0.9793665,0.00000952037,0.00003148212,0.01835674,0.0002899678,0.0002860939,0.001096168,0.00006623293,0.000228814,0.000006171766],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9995812,0.00009467824,0.00003555622,0.000008327978,0.000001444333,0.00000280252,0.000027524,0.000003433106,0.0002450645],"genre_scores_gemma":[0.9998215,0.00003035718,0.00004894042,0.000009550525,0.00000699863,0.000003231161,0.00004390749,0.000001344535,0.00003416761],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001898213,"threshold_uncertainty_score":0.0063501,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01130944864209847,"score_gpt":0.2261789448490885,"score_spread":0.21486949620699,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}