{"id":"W2749938832","doi":"10.1038/s41598-017-07790-9","title":"The vaginal microbiome of pregnant women is less rich and diverse, with lower prevalence of Mollicutes, compared to non-pregnant women","year":2017,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":201,"is_retracted":false,"has_abstract":true,"ca_institutions":"St. Michael's Hospital; University of Guelph; University of Toronto; Western University; National Research Council Canada; Lawson Health Research Institute; B.C. Women's Hospital & Health Centre; Women's Health Research Institute; Agriculture and Agri-Food Canada; University of British Columbia; Lunenfeld-Tanenbaum Research Institute; Saskatchewan Research Council (Canada); University of Saskatchewan","funders":"Canadian Institutes of Health Research; Genome British Columbia","keywords":"Microbiome; Pregnancy; Dysbiosis; Ureaplasma; Medicine; Obstetrics; Bacterial vaginosis; Lactobacillus; Physiology; Gynecology; Mycoplasma; Biology; Bioinformatics; Microbiology; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001764569,0.0001667867,0.0003304148,0.0001584312,0.001053294,0.0001508642,0.0005347288,0.00007534165,0.0001726136],"category_scores_gemma":[0.0002346296,0.0001049776,0.00004067962,0.0002772793,0.002449236,0.0002151408,0.0004702126,0.0001766882,0.00002281999],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008364055,"about_ca_system_score_gemma":0.000228227,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001290588,"about_ca_topic_score_gemma":0.00001310006,"domain_scores_codex":[0.9979204,0.00009229133,0.0004400784,0.0008193019,0.0001703497,0.0005576116],"domain_scores_gemma":[0.9967014,0.00005970397,0.0005851655,0.001951668,0.0006235342,0.00007852911],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000360011,0.0003508185,0.08585125,0.0002658413,0.000266676,0.00005013394,0.00897362,0.00001994731,0.8964586,0.00001132642,0.004186425,0.003205391],"study_design_scores_gemma":[0.0009707834,0.001067489,0.1798932,0.0006462305,0.00005364886,0.0005533029,0.00249689,0.000005901999,0.784541,0.0002242501,0.02916691,0.0003803863],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.996464,0.0007871857,0.0000341491,0.0001652876,0.001365277,0.0007416367,0.00003913143,0.00001258114,0.0003907508],"genre_scores_gemma":[0.9810665,0.0000677576,0.00004820661,0.000005691208,0.00001008368,0.0000888803,0.000004887328,0.00001090609,0.01869709],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1119175,"threshold_uncertainty_score":0.9024311,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01992903827113592,"score_gpt":0.2797869278450167,"score_spread":0.2598578895738808,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}