{"id":"W2750536694","doi":"10.1016/j.semcdb.2017.08.016","title":"Protein coding genes as hosts for noncoding RNA expression","year":2017,"lang":"en","type":"review","venue":"Seminars in Cell and Developmental Biology","topic":"Cancer-related molecular mechanisms research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":80,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Sherbrooke","funders":"","keywords":"Biology; Gene; Genetics; RNA; Non-coding RNA; Computational biology; Transposable element; Gene expression; microRNA; Genome","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0004209825,0.0004286729,0.0007826402,0.0001908821,0.0002367927,0.00004750745,0.0004397584,0.0009281219,0.00001966753],"category_scores_gemma":[0.0001637804,0.0003788012,0.0001808893,0.00006849915,0.000141163,0.000004830875,0.0006928663,0.000288301,0.00001596732],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001248526,"about_ca_system_score_gemma":0.0006099564,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000166886,"about_ca_topic_score_gemma":0.00001612181,"domain_scores_codex":[0.9979341,0.0001239027,0.0004480751,0.0008691286,0.00009734266,0.0005274633],"domain_scores_gemma":[0.9992119,0.00005239241,0.0002638756,0.0003099851,0.00004290403,0.0001189063],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00005079644,0.0000251368,0.000002558152,0.002017306,0.00003512165,0.00001640852,0.00002693773,1.046756e-7,0.3479376,0.00001808693,0.0002890509,0.6495809],"study_design_scores_gemma":[0.0003862644,0.0002138026,1.655956e-7,0.003553465,0.00002185802,0.00006150571,0.00004140783,0.000001562047,0.2963388,0.00005101176,0.6989627,0.0003674897],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.001232918,0.9941863,0.0005946308,0.000008450255,0.0002521674,0.001587303,0.00006508441,0.0000096477,0.002063451],"genre_scores_gemma":[0.0007839501,0.9905825,0.004470047,0.00002594229,0.0001500789,0.0007233614,0.0007421194,0.00006379164,0.00245827],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.6986737,"threshold_uncertainty_score":0.9998664,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04685770622848325,"score_gpt":0.3629671818215419,"score_spread":0.3161094755930587,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}