{"id":"W2751447020","doi":"10.3390/v9090253","title":"Re-Assembly and Analysis of an Ancient Variola Virus Genome","year":2017,"lang":"en","type":"article","venue":"Viruses","topic":"Poxvirus research and outbreaks","field":"Immunology and Microbiology","cited_by":16,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Victoria","funders":"Canadian Network for Research and Innovation in Machining Technology, Natural Sciences and Engineering Research Council of Canada","keywords":"Genome; Biology; Variola virus; Vaccinia; Genetics; Cowpox virus; Virus; Orthopoxvirus; Lineage (genetic); Virology; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006252632,0.0003351683,0.0005542104,0.0009071442,0.0004990517,0.0008952841,0.0004197283,0.0004248615,0.0009215385],"category_scores_gemma":[0.001785425,0.0003167396,0.0006387968,0.0008397003,0.0002199582,0.0005343176,0.0006958944,0.001525404,0.0009107045],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000297025,"about_ca_system_score_gemma":0.0003434278,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000838724,"about_ca_topic_score_gemma":0.001886104,"domain_scores_codex":[0.9996382,0.00005718118,0.00002996201,0.0001217385,0.0001145377,0.00003845137],"domain_scores_gemma":[0.9991547,0.0002122428,0.0001190476,0.0002299433,0.0001923945,0.00009175614],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002163706,0.00004819535,0.002623169,0.0002120013,0.00007266524,0.0001797414,0.0004975021,0.0004948553,0.9744834,0.0003483285,0.000243848,0.02057979],"study_design_scores_gemma":[0.00005163442,0.0005411929,0.09418894,0.00007803043,0.0004346638,0.001552249,0.0004712122,0.01360844,0.8261126,0.001466963,0.06140388,0.00009015789],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8953359,0.002533176,0.09473269,0.0002839364,0.0002931088,0.0001200825,0.004102924,0.0008128001,0.001785266],"genre_scores_gemma":[0.7446299,0.002134362,0.2124922,0.0002718503,0.0001653794,0.0001577553,0.03313109,0.001221466,0.005796042],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0009215385,"threshold_uncertainty_score":0.003306746,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04108956471401942,"score_gpt":0.3226906471109221,"score_spread":0.2816010823969027,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}