{"id":"W2752111628","doi":"10.1093/ofid/ofx163.1562","title":"Clinical Impact of Rapid Identification (ID) and Phenotypic Antimicrobial Susceptibility Testing (AST) by Accelerate Pheno™ System (AXDX) for Gram-negative (GNB) Bloodstream Infections","year":2017,"lang":"en","type":"article","venue":"Open Forum Infectious Diseases","topic":"Bacterial Identification and Susceptibility Testing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"Sinai Health System; University Health Network; University of Toronto","funders":"","keywords":"ABX test; Medicine; Gram staining; Antibiotics; Blood culture; Antimicrobial; Microbiology; Bacilli; Gram; Bacteria; Biology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006618824,0.0002613061,0.0004202536,0.00004684046,0.001116481,0.0007921656,0.0004688147,0.0001744052,0.00002695152],"category_scores_gemma":[0.003238847,0.0002540095,0.0002430024,0.00008902734,0.0003763384,0.00009848655,0.0004220231,0.0001032033,0.00000511842],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006289854,"about_ca_system_score_gemma":0.0002343861,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00157346,"about_ca_topic_score_gemma":0.0005975558,"domain_scores_codex":[0.9978768,0.0002226142,0.0007530589,0.0007410093,0.0000895285,0.0003169649],"domain_scores_gemma":[0.997215,0.0001821769,0.000928566,0.0009392701,0.0005446313,0.0001903507],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.000138011,0.0006798308,0.734419,0.0001237719,0.0001815837,2.04527e-7,0.00001930204,0.00001380083,0.2552564,0.00006679499,0.00235099,0.006750356],"study_design_scores_gemma":[0.003684038,0.001673317,0.95745,0.0001327849,0.000342307,0.00001613207,0.000261997,0.0005748353,0.03459409,0.0004783436,0.0002087687,0.0005833968],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9955195,0.00005424146,0.0007282011,0.00004612813,0.0004003201,0.001438226,0.001119484,0.00005434639,0.0006395706],"genre_scores_gemma":[0.9987018,0.00002817182,0.0002162834,0.00003232447,0.0001687814,0.0001246964,0.0006003266,0.00003564431,0.00009200849],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.223031,"threshold_uncertainty_score":0.9999912,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03346959817895554,"score_gpt":0.3512190682516561,"score_spread":0.3177494700727005,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}