{"id":"W2753859002","doi":"10.1186/s40793-017-0266-y","title":"Genome sequence of the sulfur-oxidizing Bathymodiolus thermophilus gill endosymbiont","year":2017,"lang":"en","type":"article","venue":"Standards in Genomic Sciences","topic":"Insect symbiosis and bacterial influences","field":"Agricultural and Biological Sciences","cited_by":35,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; Deutscher Akademischer Austauschdienst; National Science Foundation","keywords":"Biology; Genome; Whole genome sequencing; Oxidizing agent; Sulfur; Genetics; Sequence (biology); Evolutionary biology; Gene; Chemistry","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003342541,0.001022726,0.001001292,0.001854048,0.00057471,0.0008952774,0.0004917495,0.001000428,0.001794668],"category_scores_gemma":[0.0008433516,0.0003880115,0.00105406,0.002700607,0.0002255331,0.0003408896,0.000516166,0.0007819117,0.001652264],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006072859,"about_ca_system_score_gemma":0.001332286,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.007753347,"about_ca_topic_score_gemma":0.004855042,"domain_scores_codex":[0.9997056,0.00002661175,0.00003610817,0.0001155391,0.00007938591,0.00003678774],"domain_scores_gemma":[0.9994884,0.0001133383,0.0001179883,0.00003713767,0.0001476152,0.0000955335],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001006077,0.0001115843,0.005574951,0.001783545,0.0001155038,0.0007561786,0.0005481844,0.0008615024,0.9674114,0.0002744549,0.001895554,0.01966093],"study_design_scores_gemma":[0.0006004273,0.001583392,0.6108354,0.001084082,0.002006075,0.003667318,0.001701431,0.01240133,0.2208705,0.001517931,0.1433901,0.0003420023],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.7164486,0.007604665,0.01982182,0.0006014795,0.0003495864,0.0005647301,0.2493492,0.00145129,0.003808678],"genre_scores_gemma":[0.3626273,0.003783594,0.04065591,0.0002683582,0.0001095628,0.0003937155,0.5863383,0.0003910857,0.005432108],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.007753347,"threshold_uncertainty_score":0.01541644,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05029206521976474,"score_gpt":0.2845632774323277,"score_spread":0.2342712122125629,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}