{"id":"W2753961871","doi":"10.1038/s41598-017-11814-9","title":"Population genomics of virulence genes of Plasmodium falciparum in clinical isolates from Uganda","year":2017,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Malaria Research and Control","field":"Medicine","cited_by":50,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; Fogarty International Center; National Institutes of Health; York University","keywords":"Biology; Plasmodium falciparum; Malaria; Gene; Virulence; Genome; Population genomics; Population; Genetics; Antigenic variation; Genomics; Parasite hosting; Immunology; Medicine","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002645307,0.0001598453,0.0002394329,0.0006282943,0.0004262589,0.0005344432,0.000127037,0.0001888653,0.0008020075],"category_scores_gemma":[0.001536093,0.0002109263,0.0001310141,0.0006420451,0.0003928733,0.000159947,0.0005551177,0.0003777884,0.0001673115],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001983801,"about_ca_system_score_gemma":0.0001578213,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001735733,"about_ca_topic_score_gemma":0.001850816,"domain_scores_codex":[0.9997259,0.0000793901,0.00002573831,0.00005942257,0.00004107603,0.00006847145],"domain_scores_gemma":[0.9995947,0.0001153369,0.0001402494,0.00003899646,0.00006028904,0.0000504087],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0008310962,0.0001072114,0.7758962,0.0001353272,0.000123748,0.0009011945,0.007697578,0.0006695451,0.1891775,0.0004133761,0.0003927161,0.0236546],"study_design_scores_gemma":[0.0000107158,0.000301857,0.9916278,0.00002689967,0.00002408897,0.001628986,0.001738595,0.0003779763,0.002753921,0.0001075878,0.001390675,0.00001089968],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9996247,0.00008715838,0.00006686349,0.000007390142,7.64906e-7,0.00000431714,0.00007243235,0.000001345461,0.0001350696],"genre_scores_gemma":[0.9993494,0.000101497,0.0001878955,0.00001523421,0.000001923584,0.000009208917,0.0002119403,0.000002747939,0.0001202178],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001735733,"threshold_uncertainty_score":0.003451288,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.044652165600224,"score_gpt":0.3536825960891264,"score_spread":0.3090304304889024,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}