{"id":"W2754577572","doi":"10.1371/journal.pone.0185161","title":"The origin of multiple clones in the parthenogenetic lizard species Darevskia rostombekowi","year":2017,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Evolution and Genetic Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":33,"is_retracted":false,"has_abstract":true,"ca_institutions":"Royal Ontario Museum","funders":"Russian Academy of Sciences; Russian Science Foundation","keywords":"Biology; Parthenogenesis; Microsatellite; Genetics; Locus (genetics); Ploidy; clone (Java method); Evolutionary biology; Genotype; Lizard; Founder effect; Loss of heterozygosity; Nucleotide diversity; Zoology; Haplotype; Allele; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002583083,0.00009585679,0.0001166564,0.00001382365,0.0002478956,0.00005048988,0.0005920111,0.00006979254,0.000008136061],"category_scores_gemma":[0.0003136142,0.00006063999,0.00005405432,0.00003155116,0.0002519417,0.000002147171,0.000122179,0.00007422952,0.00001028603],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000005521058,"about_ca_system_score_gemma":0.00003809026,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003402136,"about_ca_topic_score_gemma":0.001385863,"domain_scores_codex":[0.9992214,0.00006961967,0.0001799141,0.0001606853,0.0001862134,0.0001821577],"domain_scores_gemma":[0.9988989,0.0000386622,0.0001195426,0.0008469337,0.00006879123,0.00002717127],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001402472,0.0007922592,0.3614942,0.00005709959,0.0001839557,0.000003031012,0.0004354852,0.0001427862,0.633007,0.001450923,0.001070605,0.001222303],"study_design_scores_gemma":[0.001315554,0.0004144239,0.7807275,0.00008509394,0.00008919923,0.00000487325,0.0005442668,0.002277002,0.1732823,0.0006391417,0.04028775,0.0003328971],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9954776,0.001198296,0.00007186534,0.0008555045,0.00005326983,0.0002132833,0.00002424523,0.000003842252,0.002102053],"genre_scores_gemma":[0.9961732,0.001695512,0.0003529857,0.00009773452,0.0001203426,0.00002383386,0.00002526414,0.0000106094,0.00150049],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4597248,"threshold_uncertainty_score":0.2472827,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04799826333326331,"score_gpt":0.2607331671008892,"score_spread":0.2127349037676259,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}