{"id":"W2754634911","doi":"10.1093/ofid/ofx163.1561","title":"Prospective Evaluation of Accelerate Pheno™ System (AXDX) Version 1.1 for Reducing Turn-Around-Time (TAT) in Identification/Antimicrobial Susceptibility Testing (ID/AST) of Gram-Negative Bacilli (GNB) from Positive Blood Cultures (+BC) using AXDX PhenoTest™ BC Kits","year":2017,"lang":"en","type":"article","venue":"Open Forum Infectious Diseases","topic":"Bacterial Identification and Susceptibility Testing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"Sinai Health System; University Health Network; Mount Sinai Hospital","funders":"","keywords":"Antimicrobial; Medicine; Gram; Bacilli; Identification (biology); Microbiology; Blood culture; Antibiotics; Biology; Bacteria; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001044032,0.0003044476,0.0005013376,0.00009122423,0.0007790754,0.0004875086,0.0005648367,0.0001782125,0.00003156765],"category_scores_gemma":[0.004164101,0.0003178569,0.0001663088,0.0001834286,0.0002576846,0.0001659142,0.0004127697,0.0001080386,0.000004576542],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002694617,"about_ca_system_score_gemma":0.0004246569,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.009376309,"about_ca_topic_score_gemma":0.000984296,"domain_scores_codex":[0.9972299,0.000409381,0.000833481,0.0009062643,0.0002978248,0.0003231246],"domain_scores_gemma":[0.9956551,0.0001831678,0.001396091,0.0008289317,0.001836968,0.00009979374],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003273427,0.0005596204,0.1686732,0.0001328512,0.0001692442,5.087097e-7,0.000331153,0.00131316,0.8276846,0.00004865956,0.00004456678,0.0007150107],"study_design_scores_gemma":[0.004078533,0.0003429603,0.3085721,0.0006352529,0.0007150268,0.000005243377,0.001162241,0.01086579,0.6721269,0.001029299,0.000002573978,0.0004640448],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9947112,0.00005565384,0.0002788582,0.00003239598,0.0003032114,0.00272956,0.001251126,0.00002752443,0.000610534],"genre_scores_gemma":[0.9976054,0.000004304039,0.001129147,0.00001296228,0.00013889,0.0001207496,0.0009240343,0.00003689042,0.00002756838],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1555578,"threshold_uncertainty_score":0.9999273,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03418185571708336,"score_gpt":0.3215625427938321,"score_spread":0.2873806870767487,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}