{"id":"W2755169426","doi":"10.1038/s41598-017-11928-0","title":"Differential expression and co-expression gene networks reveal candidate biomarkers of boar taint in non-castrated pigs","year":2017,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Genomics, phytochemicals, and oxidative stress","field":"Biochemistry, Genetics and Molecular Biology","cited_by":31,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University","funders":"Grønt Udviklings- og Demonstrations Program; Faculty of Health and Medical Sciences, University of Western Australia","keywords":"Boar taint; Androstenone; Biology; Candidate gene; Skatole; Gene expression; Gene; Gene expression profiling; Genetics; Endocrinology; Andrology; Medicine; Biochemistry","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001332907,0.0001644245,0.0002740617,0.0005203329,0.0001612262,0.0002930251,0.0001016461,0.0001739377,0.0008678301],"category_scores_gemma":[0.0001835557,0.0001197293,0.0003722289,0.0005925589,0.0001591729,0.0001635734,0.0002225258,0.0001642871,0.0001640981],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001914863,"about_ca_system_score_gemma":0.0001554914,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001208098,"about_ca_topic_score_gemma":0.00154563,"domain_scores_codex":[0.9998716,0.00001476184,0.000005134569,0.00005821568,0.00001793786,0.00003235941],"domain_scores_gemma":[0.999877,0.00003101736,0.00004227055,0.000007035894,0.00002062959,0.00002207717],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.001012458,0.00009627773,0.3188737,0.000362985,0.0005051713,0.0005436831,0.0004416434,0.004524868,0.6483674,0.0006513797,0.0007438482,0.02387659],"study_design_scores_gemma":[0.00000682531,0.0001587661,0.9823871,0.00001030897,0.0001006133,0.0002168683,0.0001739317,0.008451672,0.00706035,0.000399518,0.001021554,0.00001257023],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9951299,0.0003687766,0.002119588,0.00004347014,0.000004787034,0.00001018433,0.001775418,0.00004015852,0.0005077081],"genre_scores_gemma":[0.9923288,0.0002748093,0.001922189,0.00005158188,0.000008980632,0.00003774019,0.003983912,0.000009967727,0.001381982],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001208098,"threshold_uncertainty_score":0.002903223,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008538941352079707,"score_gpt":0.2563057998438833,"score_spread":0.2477668584918036,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}