{"id":"W2755829603","doi":"10.1080/19490976.2017.1378291","title":"A polymicrobial view of disease potential in Crohn's-associated adherent-invasive <i>E. coli</i>","year":2017,"lang":"en","type":"article","venue":"Gut Microbes","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":29,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University","funders":"Canadian Institutes of Health Research; Université Paris-Est Créteil Val-de-Marne; University of Southern Queensland","keywords":"Biology; Crohn's disease; Disease; Colonization; Microbiology; Escherichia coli; Pathovar; Microbiome; Inflammatory bowel disease; Enterobacteriaceae; Inflammation; Crohn disease; Immunology; Bacteria; Bioinformatics; Pathology; Genetics; Medicine","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004093942,0.0003980296,0.0002142594,0.001642984,0.0003337229,0.001100663,0.0004385419,0.0009717307,0.00361218],"category_scores_gemma":[0.0002586135,0.0001494494,0.0002982282,0.0004566533,0.001335835,0.001497954,0.000574235,0.001083208,0.0005958481],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004487885,"about_ca_system_score_gemma":0.0002184196,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005111568,"about_ca_topic_score_gemma":0.000660773,"domain_scores_codex":[0.9998591,0.00005047601,0.00001162137,0.00002053275,0.00002763788,0.00003059459],"domain_scores_gemma":[0.9997941,0.00005225768,0.00003929418,0.00001308794,0.00003080171,0.00007048866],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0015819,0.0002328267,0.02725086,0.002370264,0.00008632229,0.009525392,0.001637172,0.0007866656,0.8160277,0.05784616,0.005007926,0.07764683],"study_design_scores_gemma":[0.0002397396,0.002494445,0.2851484,0.001620271,0.0004344387,0.05365963,0.00900611,0.005804184,0.2069716,0.1381489,0.2963066,0.0001656477],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.5909951,0.2847753,0.02274184,0.04456049,0.001717689,0.00007776925,0.0004712375,0.0001977707,0.05446285],"genre_scores_gemma":[0.9176122,0.05427371,0.01278502,0.003566356,0.001305431,0.0000523558,0.000171425,0.00002838498,0.01020517],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00361218,"threshold_uncertainty_score":0.01208401,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01134561052031622,"score_gpt":0.2720740562266634,"score_spread":0.2607284457063472,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}