{"id":"W2756366695","doi":"10.1093/ofid/ofx163.418","title":"The Prevalence of Legionella Species as a Co-pathogen in HIV-Associated Community-Acquired Pneumonia","year":2017,"lang":"en","type":"article","venue":"Open Forum Infectious Diseases","topic":"Legionella and Acanthamoeba research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Manitoba","funders":"","keywords":"Medicine; Legionella; Pneumonia; Community-acquired pneumonia; Pathogen; Pathogenic organism; Human immunodeficiency virus (HIV); Legionnaires' disease; Legionella pneumophila; Microbiology; Virology; Intensive care medicine; Immunology; Internal medicine; Bacteria; Biology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003240158,0.0001997889,0.0002155121,0.0009529876,0.0005163454,0.0007957485,0.0002070531,0.0003828714,0.001529188],"category_scores_gemma":[0.001133465,0.000184049,0.0001235502,0.0005490734,0.0002513377,0.0002413766,0.0003107201,0.0002504586,0.0001200955],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003082561,"about_ca_system_score_gemma":0.0002939078,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.009141588,"about_ca_topic_score_gemma":0.0153618,"domain_scores_codex":[0.9995877,0.00009572905,0.00005234784,0.0001009852,0.00009782719,0.00006548738],"domain_scores_gemma":[0.9993684,0.0001244211,0.0002507126,0.00002843615,0.0001230622,0.0001050584],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00005522071,0.0000224403,0.9949982,0.00005195204,0.00001758979,0.0001932756,0.0001655862,0.00001164921,0.001139463,0.000009521498,0.00006031516,0.003274722],"study_design_scores_gemma":[0.000002153426,0.00006083657,0.9975919,0.00004446655,0.00002018783,0.0009895791,0.0005676457,0.000101552,0.0003395645,0.00001467361,0.00026376,0.000003803613],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9972651,0.001853939,0.00006398859,0.00003477,0.000006397019,0.00001061649,0.0001687652,0.000003638959,0.0005927591],"genre_scores_gemma":[0.9994118,0.0003085894,0.0000953167,0.00001641079,0.000006115212,0.000004023394,0.0000674426,5.982694e-7,0.00008970808],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.009141588,"threshold_uncertainty_score":0.01817679,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02232606383422224,"score_gpt":0.3200052206679808,"score_spread":0.2976791568337585,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}