{"id":"W2756395595","doi":"10.1371/journal.pbio.2003769","title":"Extreme genome diversity in the hyper-prevalent parasitic eukaryote Blastocystis","year":2017,"lang":"en","type":"article","venue":"PLoS Biology","topic":"Parasitic Infections and Diagnostics","field":"Immunology and Microbiology","cited_by":143,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canadian Institute for Advanced Research; University of Alberta; Dalhousie University","funders":"Japan Society for the Promotion of Science; Directorate for Biological Sciences; National Institute of Environmental Health Sciences; Canadian Institutes of Health Research; Biotechnology and Biological Sciences Research Council; Grantová Agentura České Republiky; Natural Sciences and Engineering Research Council of Canada; Wellcome Trust","keywords":"Biology; Genetics; Blastocystis; Gene; Genome; Pseudogene; Gene family","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002778872,0.0001496342,0.0002386664,0.00007815426,0.001148673,0.00002285114,0.0006641893,0.0002372753,0.0004802621],"category_scores_gemma":[0.0004605585,0.0001078426,0.00007359754,0.000040451,0.0005278562,0.00006401866,0.0002788478,0.00030452,0.001303897],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004243634,"about_ca_system_score_gemma":0.00002956782,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005684766,"about_ca_topic_score_gemma":0.0002530057,"domain_scores_codex":[0.9988258,0.0002872075,0.0001851007,0.0002795238,0.0000236545,0.0003986538],"domain_scores_gemma":[0.9987732,0.0004024178,0.0001139018,0.000650407,0.00004196372,0.00001814086],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00006401343,0.0004705209,0.9087132,0.00001397946,0.0001354237,0.00002650342,0.0006839811,0.000007316948,0.08262267,0.005366925,0.0006156052,0.001279815],"study_design_scores_gemma":[0.001138478,0.0002902127,0.9825649,0.00001898013,0.00009930107,0.0001446979,0.0001067841,0.00001091784,0.002085888,0.001884185,0.01143917,0.0002164987],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9897687,0.0007277428,0.0001421019,0.0007680621,0.0005982993,0.0002687798,0.00007094129,0.00003099243,0.00762442],"genre_scores_gemma":[0.9988422,0.0001640067,0.0000306851,0.0004307998,0.00006706116,0.00003235547,0.00005564031,0.000006240712,0.0003710318],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.08053678,"threshold_uncertainty_score":0.9994737,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.07258968941041585,"score_gpt":0.2830489581386219,"score_spread":0.2104592687282061,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}