{"id":"W2757518938","doi":"10.3390/v9100276","title":"Comment: Characterization of Two Historic Smallpox Specimens from a Czech Museum","year":2017,"lang":"en","type":"letter","venue":"Viruses","topic":"Poxvirus research and outbreaks","field":"Immunology and Microbiology","cited_by":16,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University","funders":"Medical Research Council; National Health and Medical Research Council; Natural Sciences and Engineering Research Council of Canada","keywords":"Variola virus; Smallpox; Ancestor; Most recent common ancestor; Czech; Biology; Genome; Evolutionary biology; Genealogy; Phylogenetics; History; Genetics; Archaeology; Gene; Virology; Vaccinia; Philosophy","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0001448293,0.0003598809,0.000678574,0.000268573,0.0002402195,0.00004275743,0.0008908609,0.0009380183,0.002903026],"category_scores_gemma":[0.0001060988,0.0003283337,0.0001785007,0.00006075355,0.0003373358,0.0001551605,0.0002616064,0.001424973,0.002209903],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001370092,"about_ca_system_score_gemma":0.0001465058,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003170298,"about_ca_topic_score_gemma":0.00006133947,"domain_scores_codex":[0.9981022,0.0003230771,0.0004245202,0.0004729846,0.0001100693,0.0005671761],"domain_scores_gemma":[0.9980195,0.0002243705,0.0005775267,0.001048725,0.0001008811,0.00002900668],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00005560533,0.00004563863,0.0001883951,0.00002896626,0.0002544319,0.00005849727,0.00008065115,1.047206e-8,0.4479311,0.00002458744,0.5506756,0.0006564902],"study_design_scores_gemma":[0.0008681662,0.0000838168,0.0009130235,0.0001056445,0.00008069199,0.000009358027,0.000002419233,2.315965e-7,0.1185626,0.00008394239,0.879022,0.0002680877],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"commentary","genre_gemma":"commentary","genre_scores_codex":[0.1583047,0.01557022,0.0003532618,0.7549564,0.01916078,0.002685877,0.03408716,0.0006548267,0.01422681],"genre_scores_gemma":[0.04619709,0.002662699,0.0001264032,0.8883906,0.006535752,0.0001811469,0.02759038,0.0002889047,0.02802704],"genre_candidate":"commentary","genre_consensus":"commentary","teacher_disagreement_score":0.3293686,"threshold_uncertainty_score":0.9999169,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04872210803333534,"score_gpt":0.2893828947472645,"score_spread":0.2406607867139292,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}