{"id":"W2759397805","doi":"10.1534/g3.117.300290","title":"Pervasive, Genome-Wide Transcription in the Organelle Genomes of Diverse Plastid-Bearing Protists","year":2017,"lang":"en","type":"article","venue":"G3 Genes Genomes Genetics","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":16,"is_retracted":false,"has_abstract":true,"ca_institutions":"Western University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Genome; Organelle; Transcription (linguistics); Genetics; RNA; Gene; Plastid; Computational biology; Non-coding RNA","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002075886,0.0001927146,0.0002186532,0.0004710765,0.0003791848,0.0005361266,0.0001170692,0.0002902212,0.0006530396],"category_scores_gemma":[0.0005055132,0.0001895982,0.0004515139,0.000625081,0.0002981008,0.0002472656,0.0004522878,0.0004156574,0.0003916897],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002686211,"about_ca_system_score_gemma":0.0002946224,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001457058,"about_ca_topic_score_gemma":0.004410055,"domain_scores_codex":[0.999608,0.00002650375,0.00002052427,0.0002235091,0.0000769507,0.00004450724],"domain_scores_gemma":[0.99962,0.000112724,0.0001033271,0.00004760765,0.00006231299,0.00005407468],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001025422,0.0000102314,0.02111831,0.0001597315,0.00003555805,0.00009478059,0.0004004586,0.0002239157,0.9728511,0.0001338914,0.0001283822,0.004741026],"study_design_scores_gemma":[0.00001455375,0.0002237288,0.8234474,0.00007601659,0.0001754255,0.0009998431,0.0009360255,0.002140082,0.1583211,0.0005663733,0.01305978,0.00003973471],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9866785,0.001268239,0.004176077,0.00007894322,0.00001474013,0.00001886267,0.005966289,0.0001384336,0.001659843],"genre_scores_gemma":[0.9846469,0.0005149074,0.004935195,0.0001678795,0.000008538633,0.0000385921,0.008590212,0.00006504085,0.001032703],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001457058,"threshold_uncertainty_score":0.002897084,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02418301102866835,"score_gpt":0.2429739290619097,"score_spread":0.2187909180332414,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}