{"id":"W2760573101","doi":"10.1128/genomea.00721-17","title":"Genome Sequences for Multiple <i>Clavibacter</i> Strains from Different Subspecies","year":2017,"lang":"en","type":"article","venue":"Genome Announcements","topic":"Plant Pathogenic Bacteria Studies","field":"Agricultural and Biological Sciences","cited_by":5,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canadian Food Inspection Agency","funders":"Canadian Food Inspection Agency","keywords":"Subspecies; Clavibacter michiganensis; Biology; Genome; Whole genome sequencing; Niche; Genetics; Pathogen; Microbiology; Botany; Gene; Zoology; Ecology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["sts"],"consensus_categories":[],"category_scores_codex":[0.0001310084,0.0002748939,0.0003355225,0.000009727399,0.001308078,0.0003619484,0.0008685146,0.00008655188,0.0002858819],"category_scores_gemma":[0.00005858036,0.0001136854,0.0001452277,0.0000326903,0.0001495679,0.0002734309,0.0002775335,0.00007676399,0.00006710231],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006533979,"about_ca_system_score_gemma":0.0000089116,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003018903,"about_ca_topic_score_gemma":0.002421374,"domain_scores_codex":[0.9983782,0.00003058272,0.0002928479,0.0005135959,0.0002508177,0.0005340144],"domain_scores_gemma":[0.9992126,0.0001027716,0.0002787939,0.0002119851,0.00008063191,0.0001132415],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00003786312,0.00007505316,0.04258008,0.000005143769,0.00008750952,0.000004645498,0.0001616233,4.510393e-7,0.9546692,0.00001531169,0.00006906452,0.00229404],"study_design_scores_gemma":[0.000366646,0.0001689417,0.9000785,0.00001182263,0.00002691334,0.000001241133,0.0002401719,0.000004922695,0.001521592,0.0003110435,0.09698881,0.0002793516],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9829817,0.0002517761,0.00001238861,0.0006890051,0.0004277496,0.0005335322,0.01440598,0.00005602517,0.0006418102],"genre_scores_gemma":[0.9948345,0.0002962525,0.0001523626,0.000172513,0.0007192459,0.0001223384,0.003002661,0.000002172009,0.0006979217],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9531476,"threshold_uncertainty_score":0.9999921,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05629668060492998,"score_gpt":0.2448292499759322,"score_spread":0.1885325693710022,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}