{"id":"W2761917754","doi":"10.18632/oncotarget.21817","title":"Host cell transcriptome modification upon exogenous HPV16 L2 protein expression","year":2017,"lang":"en","type":"article","venue":"Oncotarget","topic":"RNA modifications and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"York University; National Cancer Institute; NYU Langone Medical Center; National Institutes of Health; American Cancer Society","keywords":"Transcriptome; Biology; Cell cycle; Proteome; Retinoblastoma protein; HaCaT; Mitosis; Gene expression profiling; Genetics; Gene expression; Cell biology; Gene; Cell culture; Molecular biology","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001314598,0.0001472964,0.0001143281,0.00002603641,0.0004435412,0.00009024007,0.0004257048,0.0001550408,0.00007763863],"category_scores_gemma":[0.00002145684,0.0001362094,0.00008569068,0.00002380749,0.00005695056,0.00001330332,0.00004872581,0.00008337017,0.00006053531],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002350157,"about_ca_system_score_gemma":0.00007478026,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00005776179,"about_ca_topic_score_gemma":0.00001720138,"domain_scores_codex":[0.9990485,0.00003631792,0.0001718662,0.0003790814,0.0001386548,0.0002255374],"domain_scores_gemma":[0.998634,0.000001697852,0.0001616622,0.001031502,0.00008096312,0.00009016334],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00005422654,0.0001096925,0.0006165038,0.00001722695,0.000006834827,0.000001276025,0.0000679876,0.00002027321,0.9964939,0.00005371386,0.001910936,0.0006474588],"study_design_scores_gemma":[0.0004563577,0.0001120456,0.007960258,0.00001479976,0.000008342806,0.000001685636,0.00003406025,0.00005546642,0.8425785,0.00006300453,0.1485299,0.0001855619],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9850006,0.0009299723,0.004267552,0.0004292489,0.0001756972,0.0003635059,0.00004631785,0.00001899867,0.008768087],"genre_scores_gemma":[0.9907997,0.000201502,0.001513679,0.00007168238,0.0002839184,0.0001641936,0.0001465122,0.00002838074,0.006790409],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1539153,"threshold_uncertainty_score":0.555446,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01942774712811849,"score_gpt":0.2734762584994015,"score_spread":0.254048511371283,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}