{"id":"W2762775240","doi":"10.1111/age.12631","title":"Genome‐wide population structure and admixture analysis reveals weak differentiation among Ugandan goat breeds","year":2018,"lang":"en","type":"article","venue":"Animal Genetics","topic":"Genetic and phenotypic traits in livestock","field":"Biochemistry, Genetics and Molecular Biology","cited_by":39,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta","funders":"Wageningen University and Research; National Agricultural Research Organisation; World Bank Group","keywords":"Biology; Breed; Genetic diversity; Population; Crossbreed; Inbreeding; Single-nucleotide polymorphism; Genetic distance; Genetic admixture; Genetic structure; Boer goat; Genetic variation; Genetics; Evolutionary biology; Veterinary medicine; Genotype; Gene; Demography","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000680736,0.0002215403,0.0002112102,0.00008464837,0.0001570418,0.00005275612,0.0001646792,0.000268545,0.00008019034],"category_scores_gemma":[0.00003166069,0.0002103216,0.00008939527,0.0002296935,0.0001376787,0.000004961633,0.0001141035,0.00009380862,0.000003194307],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001110721,"about_ca_system_score_gemma":0.00001896036,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002595133,"about_ca_topic_score_gemma":0.000349023,"domain_scores_codex":[0.9988036,0.00006547284,0.0002577339,0.0004508985,0.0001630289,0.000259285],"domain_scores_gemma":[0.9992526,0.000009902196,0.0001327856,0.000352467,0.0001217242,0.000130496],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00006381908,0.0000204386,0.8211934,0.00001368788,0.0002750942,1.613961e-7,0.0001303032,0.0001927177,0.1769288,0.0001912188,0.0001372099,0.0008531334],"study_design_scores_gemma":[0.0002472781,0.0006356628,0.9844268,0.00000439543,0.0003804253,0.000003557459,0.00003411236,0.0001511317,0.01212703,0.0009136375,0.0008252762,0.0002506949],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9911911,0.0008211271,0.007313409,0.00003778987,0.0001078267,0.0001841576,0.00006366889,0.0000150197,0.0002659308],"genre_scores_gemma":[0.9918748,0.00007259212,0.006342395,0.000119914,0.0006272913,0.000004558211,0.0005210272,0.00002703815,0.0004103428],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1648018,"threshold_uncertainty_score":0.8576667,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.006300357301299317,"score_gpt":0.2266943899617478,"score_spread":0.2203940326604485,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}