{"id":"W2763378576","doi":"10.3390/vetsci4040057","title":"Genomic Analysis of Third Generation Cephalosporin Resistant Escherichia coli from Dairy Cow Manure","year":2017,"lang":"en","type":"article","venue":"Veterinary Sciences","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":26,"is_retracted":false,"has_abstract":true,"ca_institutions":"Public Health Agency of Canada; Agriculture and Agri-Food Canada","funders":"Government of Canada","keywords":"Ceftiofur; Microbiology; Biology; Cefotaxime; Ampicillin; Cephalosporin; Cefoxitin; Escherichia coli; Antibiotic resistance; Tetracycline; Pathogenic Escherichia coli; Clavulanic acid; Multiple drug resistance; Amoxicillin; Antibiotics; Bacteria; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001566461,0.0004058254,0.0004748474,0.0009544552,0.0002660022,0.0006979792,0.0002412038,0.000442198,0.0004616707],"category_scores_gemma":[0.0006690093,0.0001791442,0.0006023352,0.001409779,0.0002047955,0.0001663716,0.000345972,0.0003254023,0.0002971689],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002169905,"about_ca_system_score_gemma":0.0004086512,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004073007,"about_ca_topic_score_gemma":0.003057163,"domain_scores_codex":[0.9996749,0.00002635318,0.00003427042,0.00009532497,0.00009929552,0.00006979798],"domain_scores_gemma":[0.9996049,0.00008367955,0.0001256507,0.00002374031,0.0001109538,0.00005120436],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.000267591,0.0001049656,0.02725342,0.0002403864,0.00004319004,0.0008219035,0.0005274227,0.0002092439,0.963971,0.00003429862,0.00009835676,0.00642806],"study_design_scores_gemma":[0.00003117027,0.001002557,0.8056123,0.00009246956,0.0003544301,0.005449412,0.002314001,0.001378128,0.1762434,0.00006002648,0.007417359,0.00004468155],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9940636,0.0003910772,0.001053593,0.00004997687,0.00001269279,0.0000612905,0.003930251,0.00002030371,0.0004173748],"genre_scores_gemma":[0.9777827,0.001119599,0.005879415,0.0001482029,0.00002973104,0.0001186939,0.01350464,0.00003264503,0.001384373],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004073007,"threshold_uncertainty_score":0.008098602,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04180216057645109,"score_gpt":0.300634696459695,"score_spread":0.258832535883244,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}