{"id":"W2763549924","doi":"10.1038/s41598-017-13441-w","title":"Protein interaction network of alternatively spliced NudCD1 isoforms","year":2017,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":16,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Sherbrooke","funders":"Fonds de Recherche du Québec - Santé; Natural Sciences and Engineering Research Council of Canada","keywords":"Gene isoform; Alternative splicing; Protein isoform; Biology; Stable isotope labeling by amino acids in cell culture; Exon; RNA Helicase A; Subcellular localization; RNA splicing; Cell biology; Phenotype; Nuclear localization sequence; Molecular biology; Gene; Helicase; RNA; Cytoplasm; Proteomics; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001309626,0.0001613555,0.0002176461,0.0005348636,0.0004275994,0.0004367052,0.0001915527,0.0002388834,0.001063696],"category_scores_gemma":[0.0002165635,0.0001877906,0.0002147925,0.0004197573,0.0001256218,0.0003017951,0.0002879169,0.0001770861,0.0004966117],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004388572,"about_ca_system_score_gemma":0.0001891259,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000931324,"about_ca_topic_score_gemma":0.0009491696,"domain_scores_codex":[0.9998314,0.00001597893,0.00001033744,0.00007214444,0.00003869285,0.00003127487],"domain_scores_gemma":[0.999836,0.00001897336,0.00005266112,0.000008075182,0.00003810151,0.00004611707],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0004655488,0.00004626862,0.03014946,0.000202663,0.00007471298,0.0007590358,0.0001574042,0.0007071245,0.9570557,0.00113943,0.0006196712,0.0086228],"study_design_scores_gemma":[0.00006435295,0.0002309617,0.4905095,0.00006039557,0.0002158832,0.005191688,0.0006375471,0.04714735,0.4219608,0.00205899,0.03186208,0.00006048877],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9934922,0.002387994,0.001766763,0.00008864043,0.000007701379,0.00001073177,0.0004097521,0.00003997426,0.001796195],"genre_scores_gemma":[0.9948495,0.0008607375,0.001429006,0.00002793973,0.000004760335,0.00001413677,0.0009525162,0.000008023224,0.001853418],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001063696,"threshold_uncertainty_score":0.003558457,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02184863409781655,"score_gpt":0.2856869379229767,"score_spread":0.2638383038251601,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}