{"id":"W2765150290","doi":"10.1002/pld3.16","title":"Genome‐wide binding analysis of AtGNC and AtCGA1 demonstrates their cross‐regulation and common and specific functions","year":2017,"lang":"en","type":"article","venue":"Plant Direct","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":21,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Transcription factor; Gene; Chromatin immunoprecipitation; Genetics; Promoter; Computational biology; Gene expression","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000258626,0.00008527259,0.0002089262,0.00004001312,0.000495703,0.0001422497,0.00009788103,0.0000693113,0.00002887573],"category_scores_gemma":[0.0000425702,0.00003475613,0.00003478704,0.0001123256,0.0002514663,0.00007470668,0.00009245829,0.0000606504,0.000001405233],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000004721958,"about_ca_system_score_gemma":0.000002177865,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002010969,"about_ca_topic_score_gemma":0.001453421,"domain_scores_codex":[0.9993844,0.00006228003,0.0001144293,0.0002219588,0.00006970976,0.0001472198],"domain_scores_gemma":[0.9993975,0.0003664728,0.00008927992,0.00006423107,0.00002093151,0.00006154527],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00002119201,0.00000669507,0.6383352,0.000002281027,0.00007969481,0.000002464039,0.00001750395,0.000001452333,0.358417,0.000009290296,0.000008234195,0.003099023],"study_design_scores_gemma":[0.00005820576,0.00004918616,0.9939989,0.000007842478,0.00004900189,0.00001374784,0.00003953122,0.0003568724,0.004544087,0.00003844061,0.0007686257,0.00007558993],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9977026,0.0006602304,0.000001286609,0.0001479062,0.00001738996,0.00008254725,0.0006814955,0.00001269021,0.000693845],"genre_scores_gemma":[0.9988552,0.0006351094,0.00001346521,0.000005850417,0.0000192087,0.000002794454,0.000380158,4.958541e-7,0.00008769868],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3556637,"threshold_uncertainty_score":0.3812597,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03900440495146276,"score_gpt":0.256374626805532,"score_spread":0.2173702218540693,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}