{"id":"W2765901796","doi":"10.1186/s13071-017-2420-1","title":"Isothermal diagnostic assays for the detection of soil-transmitted helminths based on the SmartAmp2 method","year":2017,"lang":"en","type":"article","venue":"Parasites & Vectors","topic":"Parasites and Host Interactions","field":"Immunology and Microbiology","cited_by":43,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University","funders":"Natural Sciences and Engineering Research Council of Canada; Fonds de recherche du Québec – Nature et technologies; Centers for Disease Control and Prevention","keywords":"Loop-mediated isothermal amplification; Ascaris lumbricoides; Necator americanus; Biology; Trichuris trichiura; Parasitology; Primer (cosmetics); Computational biology; Helminths; Microbiology; Immunology; DNA; Genetics; Chemistry; Zoology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001916737,0.001387834,0.0009774365,0.001238658,0.0002699987,0.0006532852,0.001061141,0.001014189,0.002165294],"category_scores_gemma":[0.002333969,0.000663177,0.0008376545,0.0006116565,0.0007514234,0.0006675174,0.0007271868,0.001431269,0.002121404],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004138285,"about_ca_system_score_gemma":0.0004331062,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002039786,"about_ca_topic_score_gemma":0.0004312303,"domain_scores_codex":[0.9970899,0.0007954615,0.0002170835,0.0005940028,0.001112849,0.0001907795],"domain_scores_gemma":[0.9982564,0.0006138523,0.0004523022,0.0001898763,0.0003866874,0.0001009478],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001291762,0.00008643781,0.001821808,0.000387088,0.00002883458,0.00005472369,0.00008042618,0.0003831127,0.9801015,0.0002473599,0.0003435363,0.01633606],"study_design_scores_gemma":[0.0000133028,0.0004018864,0.003152632,0.00004565114,0.00005227006,0.000452334,0.0000386493,0.005781066,0.9844629,0.0001472444,0.005407646,0.00004457408],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"methods","genre_gemma":"empirical","genre_scores_codex":[0.3785086,0.005565051,0.5980626,0.0005113454,0.0004725038,0.001869496,0.002464149,0.004457327,0.008088826],"genre_scores_gemma":[0.4510135,0.002667508,0.5320743,0.0004745434,0.00008822105,0.002119287,0.003370324,0.0002268037,0.007965488],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.002165294,"threshold_uncertainty_score":0.01013678,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02150262176050064,"score_gpt":0.3162156761194088,"score_spread":0.2947130543589081,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}