{"id":"W2765901796","doi":"10.1186/s13071-017-2420-1","title":"Isothermal diagnostic assays for the detection of soil-transmitted helminths based on the SmartAmp2 method","year":2017,"lang":"en","type":"article","venue":"Parasites & Vectors","topic":"Parasites and Host Interactions","field":"Immunology and Microbiology","cited_by":43,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University","funders":"Natural Sciences and Engineering Research Council of Canada; Fonds de recherche du Québec – Nature et technologies; Centers for Disease Control and Prevention","keywords":"Loop-mediated isothermal amplification; Ascaris lumbricoides; Necator americanus; Biology; Trichuris trichiura; Parasitology; Primer (cosmetics); Computational biology; Helminths; Microbiology; Immunology; DNA; Genetics; Chemistry; Zoology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004836979,0.0001869789,0.000231745,0.00006451543,0.001216408,0.00005064167,0.0004465256,0.0001467301,0.0005021405],"category_scores_gemma":[0.001544816,0.0001073444,0.0002575131,0.00006119191,0.0002392989,0.00007151369,0.00002408335,0.0002818844,0.0001729096],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002259637,"about_ca_system_score_gemma":0.00003216829,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001010863,"about_ca_topic_score_gemma":0.0006071515,"domain_scores_codex":[0.9989789,0.0002069926,0.0002413494,0.0002337167,0.00004660896,0.0002924886],"domain_scores_gemma":[0.9887099,0.01022616,0.000272908,0.000687485,0.00008626449,0.00001724995],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0008294018,0.0004083336,0.08195122,0.00003701144,0.0008118264,0.000001997628,0.0006878433,0.001179024,0.8806018,0.002181125,0.002389499,0.0289209],"study_design_scores_gemma":[0.0008147194,0.0004012721,0.4358958,0.0000606657,0.000292171,0.00001211161,0.000121224,0.003308866,0.5323,0.0002112161,0.02637467,0.0002072825],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8569089,0.001256306,0.1306188,0.003536377,0.002639215,0.001455989,0.0002322596,0.00009110478,0.00326105],"genre_scores_gemma":[0.998485,0.00002650435,0.0001290021,0.0002788285,0.00007169894,0.0002289571,0.00002157911,0.00002218363,0.0007362812],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3539446,"threshold_uncertainty_score":0.9355747,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02150262176050064,"score_gpt":0.3162156761194088,"score_spread":0.2947130543589081,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}