{"id":"W2766176933","doi":"10.2196/resprot.7989","title":"Multisite Semiautomated Clinical Data Repository for Duplication 15q Syndrome: Study Protocol and Early Uses","year":2017,"lang":"en","type":"article","venue":"JMIR Research Protocols","topic":"Genomic variations and chromosomal abnormalities","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; Health Science Center, University of Tennessee","keywords":"Data collection; Workflow; Autism; Minimum Data Set; Information repository; Stakeholder; Computer science; Medicine; Database; Nursing; Psychiatry; Computer data storage","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001960876,0.0001442862,0.0001978025,0.00004896206,0.0009896364,0.0005377511,0.001098107,0.0001810162,0.000006099454],"category_scores_gemma":[0.0004350415,0.000126227,0.0000455248,0.00003972444,0.0002585222,0.00004133371,0.001298733,0.0001988651,0.000007754004],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001600902,"about_ca_system_score_gemma":0.0001437116,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001309601,"about_ca_topic_score_gemma":0.00004373854,"domain_scores_codex":[0.9978673,0.0003486312,0.0004533581,0.0007242441,0.0002624278,0.0003439878],"domain_scores_gemma":[0.9968478,0.00006362706,0.0002367628,0.002350213,0.0003701846,0.0001314278],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001201561,0.001686041,0.9599531,0.0004542019,0.0001366778,0.00002300102,0.0001556964,9.935152e-7,0.02568374,0.00009034415,0.0070083,0.003606325],"study_design_scores_gemma":[0.004573453,0.004333435,0.8229104,0.0001892489,0.000006242998,0.00003847832,0.0001374492,0.0001567561,0.007840583,0.00006882332,0.1595085,0.0002366002],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"protocol","genre_gemma":"protocol","genre_scores_codex":[0.3094743,0.000001237757,0.00003790396,0.00005878124,0.000006710369,0.6901934,0.00005014952,0.00001919896,0.0001582938],"genre_scores_gemma":[0.2472448,3.482453e-7,0.0005264025,0.000006032793,0.0001648724,0.7508581,0.00004207359,0.00002113023,0.001136196],"genre_candidate":"protocol","genre_consensus":"protocol","teacher_disagreement_score":0.1525002,"threshold_uncertainty_score":0.7611583,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.3313654679121415,"score_gpt":0.5900918099060096,"score_spread":0.2587263419938681,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}