{"id":"W2766544605","doi":"10.1016/j.molimm.2017.10.015","title":"The effect of loss of O-antigen ligase on phagocytic susceptibility of motile and non-motile Pseudomonas aeruginosa","year":2017,"lang":"en","type":"article","venue":"Molecular Immunology","topic":"Bacterial biofilms and quorum sensing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Guelph","funders":"National Institute of Allergy and Infectious Diseases; National Center for Research Resources; National Institute of General Medical Sciences; Canada Research Chairs; Audrey and Theodor Geisel School of Medicine at Dartmouth; Canadian Institutes of Health Research; National Institute for Health and Care Research; National Institutes of Health; Cystic Fibrosis Foundation","keywords":"Pseudomonas aeruginosa; Antigen; Motility; Microbiology; Biology; Immune system; Phenotype; Phagocytosis; Mutant; Bacteria; Immunology; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003584512,0.0001827139,0.0003807603,0.00003246789,0.000153831,0.00001536177,0.0003452752,0.0002117332,0.000004898314],"category_scores_gemma":[0.000331081,0.0001352726,0.0001565246,0.00002984083,0.0009558012,0.000004132988,0.0002861512,0.0001017208,0.000001643341],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000006926166,"about_ca_system_score_gemma":0.00004163136,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001627391,"about_ca_topic_score_gemma":0.00002456579,"domain_scores_codex":[0.9988605,0.0001665956,0.0003312047,0.0003027325,0.00009358839,0.0002453635],"domain_scores_gemma":[0.9982932,0.00005809634,0.0003914492,0.001130279,0.00009254766,0.00003446656],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0006271512,0.0000437379,0.01095407,0.00005147035,0.0001633912,0.000008558247,0.00002475068,0.000005004869,0.984612,0.00006732457,0.00001707454,0.003425406],"study_design_scores_gemma":[0.001016862,0.002038171,0.04445591,0.00003672586,0.00003618803,0.00001607236,0.0000144463,0.000013153,0.9520089,0.00002123419,0.0002427605,0.00009956762],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9981704,0.0009442284,0.00003623251,0.00008556208,0.0002135851,0.0002513861,0.00002716765,0.000003128488,0.0002682911],"genre_scores_gemma":[0.9995417,0.0002623867,0.00008767508,0.00001456458,0.00002628014,0.000003956682,0.0000191155,0.00001694052,0.00002741012],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03350184,"threshold_uncertainty_score":0.5516257,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.003924397952253419,"score_gpt":0.2360776044986992,"score_spread":0.2321532065464458,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}