{"id":"W2766613424","doi":"10.1128/jvi.01725-17","title":"Functional Insights into the Adjacent Stem-Loop in Honey Bee Dicistroviruses That Promotes Internal Ribosome Entry Site-Mediated Translation and Viral Infection","year":2017,"lang":"en","type":"article","venue":"Journal of Virology","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":16,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research; Natural Sciences and Engineering Research Council of Canada; Government of Canada","keywords":"Internal ribosome entry site; Biology; Ribosome; Translation (biology); Pseudoknot; Cell biology; Eukaryotic Ribosome; Ribosomal binding site; Eukaryotic translation; RNA; Genetics; Virology; Messenger RNA; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003897265,0.0001106239,0.0002132632,0.00004811797,0.0003783655,0.00008724935,0.0001857277,0.00009404265,0.00003101224],"category_scores_gemma":[0.0001661402,0.0000373586,0.00006417483,0.00005460454,0.0002555208,0.0003846211,0.00009401012,0.0003614884,0.000006820047],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003936934,"about_ca_system_score_gemma":0.00001500519,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007329559,"about_ca_topic_score_gemma":0.005758842,"domain_scores_codex":[0.9989311,0.000205865,0.0002715184,0.0001349291,0.0002705344,0.0001860996],"domain_scores_gemma":[0.9990447,0.0004450492,0.000340266,0.0000377021,0.00006559825,0.00006667389],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0004788797,0.00009066929,0.266496,0.000005447667,0.00004553559,0.00002796798,0.0004011264,0.000008471503,0.7143033,0.00001499944,0.0001977212,0.01792996],"study_design_scores_gemma":[0.00054372,0.0007201418,0.9890621,0.00003265859,0.00001507008,0.00006376242,0.00007070826,0.0001973937,0.00610492,0.0003036231,0.002813317,0.00007258357],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9945302,0.001404199,0.00001131637,0.003683389,0.0002011387,0.0001158016,0.00001515855,0.000006105689,0.00003267772],"genre_scores_gemma":[0.9972861,0.002248517,0.00000754277,0.0001465213,0.000254688,0.000004960833,0.000007556043,8.020255e-7,0.00004325165],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7225661,"threshold_uncertainty_score":0.3213569,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05387801045032285,"score_gpt":0.2704979249902894,"score_spread":0.2166199145399666,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}