{"id":"W2767423600","doi":"10.1098/rspb.2017.1106","title":"Admixture mapping in a hybrid zone reveals loci associated with avian feather coloration","year":2017,"lang":"en","type":"article","venue":"Proceedings of the Royal Society B Biological Sciences","topic":"melanin and skin pigmentation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":69,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Division of Environmental Biology; Natural Sciences and Engineering Research Council of Canada; Université de Lausanne; Parks Canada; Alberta Conservation Association","keywords":"Plumage; Biology; Feather; Evolutionary biology; Genetics; Genetic admixture; Single-nucleotide polymorphism; Zebra finch; Hybrid zone; Gene; Zoology; Population; Genetic variation; Gene flow; Genotype","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004196621,0.0002741631,0.0002615756,0.001099955,0.0003786014,0.0003321546,0.0002354883,0.0004045756,0.0008245863],"category_scores_gemma":[0.0004167838,0.0002022314,0.000365852,0.0005612657,0.0003282226,0.00007447423,0.0004169263,0.0004461267,0.0000969312],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001715014,"about_ca_system_score_gemma":0.00009558767,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002280462,"about_ca_topic_score_gemma":0.003844145,"domain_scores_codex":[0.999581,0.00008775875,0.00001911842,0.000201789,0.00005478468,0.00005549616],"domain_scores_gemma":[0.9995448,0.000167919,0.0001080984,0.00004893686,0.00002495527,0.0001053981],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.001874356,0.0002544343,0.3753063,0.00006620496,0.0007567989,0.001189148,0.00121429,0.0006966954,0.6049893,0.0003424642,0.0000963633,0.01321352],"study_design_scores_gemma":[0.00002816353,0.0001754426,0.9948419,0.000005099701,0.0000798867,0.0005356424,0.0001406046,0.0008592051,0.003038991,0.00007342935,0.0002125203,0.000009080602],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9994849,0.00003539278,0.0003349188,0.000005802649,0.000001408501,0.000003271394,0.00003819375,0.000005550683,0.00009040129],"genre_scores_gemma":[0.9992465,0.00001599154,0.0004664574,0.00001314352,0.000001674334,0.000003898374,0.0001229626,0.000003785626,0.0001257114],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002280462,"threshold_uncertainty_score":0.004534423,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02447153249996387,"score_gpt":0.2569592763356972,"score_spread":0.2324877438357333,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}