{"id":"W2767650726","doi":"10.1021/acs.jproteome.7b00672","title":"Stage Dependence, Cell-Origin Independence, and Prognostic Capacity of Serum Glycan Fucosylation, β1–4 Branching, β1–6 Branching, and α2–6 Sialylation in Cancer","year":2017,"lang":"en","type":"article","venue":"Journal of Proteome Research","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":22,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto; Sunnybrook Health Science Centre","funders":"National Cancer Institute; University of Texas MD Anderson Cancer Center; Flinn Foundation","keywords":"Fucosylation; Stage (stratigraphy); Ovarian cancer; Lung cancer; Glycomics; Cancer; Oncology; Internal medicine; Biology; Medicine; Glycan; Cancer research; Biochemistry; Glycoprotein","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003950199,0.0001711327,0.0003121622,0.0004311785,0.0004060107,0.0002190926,0.0004550193,0.0002560385,0.00008157835],"category_scores_gemma":[0.001349116,0.0001506593,0.00006351143,0.0002244699,0.0003758688,0.0001064356,0.0002789727,0.0009474164,0.000001734851],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006712803,"about_ca_system_score_gemma":0.0005903462,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001010963,"about_ca_topic_score_gemma":0.001576217,"domain_scores_codex":[0.9970537,0.000421948,0.0005759653,0.0003521881,0.001141468,0.0004546704],"domain_scores_gemma":[0.9978337,0.00006969558,0.0005388775,0.0003944676,0.0009299864,0.0002332524],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0003767756,0.0001202325,0.5424963,0.0003372956,0.00003495365,0.00002364084,0.0003843968,0.00009601241,0.4491835,0.00009627599,0.00003915644,0.006811505],"study_design_scores_gemma":[0.002839071,0.001072568,0.7434954,0.0003077632,0.00001196604,0.00005231568,0.0002285571,0.001138727,0.2476721,0.001046712,0.001880229,0.0002545743],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9964485,0.001076174,0.0005215392,0.0004360741,0.00007083004,0.0008783034,0.00003057927,0.00000266625,0.0005353565],"genre_scores_gemma":[0.9973006,0.001054049,0.0007473581,0.000008927739,0.0002058714,0.00003677288,0.00000339246,0.00002157194,0.0006214883],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2015114,"threshold_uncertainty_score":0.6143706,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06543450424959124,"score_gpt":0.3906442880596173,"score_spread":0.3252097838100261,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}