{"id":"W2768939170","doi":"10.1186/s12864-017-4307-0","title":"Chromosome level assembly and secondary metabolite potential of the parasitic fungus Cordyceps militaris","year":2017,"lang":"en","type":"article","venue":"BMC Genomics","topic":"Fungal Biology and Applications","field":"Medicine","cited_by":49,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research; Génome Québec","keywords":"Cordyceps militaris; Biology; Secondary metabolite; Fungus; Cordyceps; Metabolite; Chromosome; Genetics; Botany; Computational biology; Microbiology; Gene; Biochemistry","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008427484,0.000261351,0.000196323,0.0009456965,0.0002541288,0.0003854416,0.0001660206,0.0002187602,0.001628241],"category_scores_gemma":[0.000299282,0.0001326595,0.0003313472,0.0006503289,0.00007911804,0.0001463227,0.000250098,0.0003125559,0.0005822084],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003770837,"about_ca_system_score_gemma":0.000296208,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005702892,"about_ca_topic_score_gemma":0.007105388,"domain_scores_codex":[0.9999311,0.000005601777,0.000006341667,0.00002781497,0.00001745942,0.00001180568],"domain_scores_gemma":[0.9998116,0.00004743557,0.00005183882,0.00002047628,0.00004523779,0.0000233743],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002966057,0.00002648021,0.01361313,0.0002112502,0.00003148689,0.0001413349,0.0001541519,0.0006034378,0.9741363,0.0001382215,0.0001818039,0.01046584],"study_design_scores_gemma":[0.0000329127,0.0003675527,0.5309237,0.00008236833,0.0003042773,0.0008332055,0.0003382674,0.007373764,0.4424962,0.0002692012,0.01694367,0.00003480099],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9872435,0.0008999567,0.004555929,0.00007489165,0.00001132685,0.00003629573,0.005358256,0.0002108569,0.001609024],"genre_scores_gemma":[0.9535876,0.0007319714,0.01816469,0.00004654173,0.000007893031,0.00004664491,0.02454029,0.0000929033,0.002781596],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.005702892,"threshold_uncertainty_score":0.01133937,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03422901314546652,"score_gpt":0.2806877524333354,"score_spread":0.2464587392878689,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}