{"id":"W2772846116","doi":"10.3390/pathogens6040064","title":"Longitudinal Surveillance of Porcine Rotavirus B Strains from the United States and Canada and In Silico Identification of Antigenically Important Sites","year":2017,"lang":"en","type":"article","venue":"Pathogens","topic":"Viral gastroenteritis research and epidemiology","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"University of Minnesota","keywords":"Antigenicity; Rotavirus; Virology; Biology; In silico; Antigen; Neutralization; Epitope; Amino acid; Peptide sequence; Genetics; Protein subunit; Virus; Gene","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004226164,0.0003108754,0.0002168354,0.0009806438,0.0008373987,0.0004961705,0.0003918073,0.000221302,0.0005956869],"category_scores_gemma":[0.00107464,0.0001563348,0.000279714,0.001474538,0.0002295198,0.0001264362,0.0002760708,0.0003113817,0.00008650905],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.004936062,"about_ca_system_score_gemma":0.007578729,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.9446336,"about_ca_topic_score_gemma":0.9643551,"domain_scores_codex":[0.9997031,0.0000325945,0.00001278223,0.00005780514,0.00009588539,0.00009777152],"domain_scores_gemma":[0.9991666,0.0000687084,0.0001577361,0.00002748685,0.000406154,0.0001733797],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00005863902,0.00001491805,0.9946159,0.00001376411,0.00004619934,0.00006153698,0.0001108068,0.0002946693,0.001571016,0.00003011425,0.0002631219,0.002919304],"study_design_scores_gemma":[0.000003567797,0.00002957936,0.9974359,0.000009296373,0.00002293135,0.00009793878,0.0003925842,0.001006956,0.0004738709,0.00001156235,0.000511715,0.000004085435],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9971316,0.0002199623,0.0002283218,0.00006238699,0.00000355176,0.00001429237,0.001756223,0.000008162091,0.0005755062],"genre_scores_gemma":[0.996217,0.0002768076,0.0005812075,0.00004913102,0.000001889595,0.000006845738,0.002546914,0.000002944231,0.0003173122],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0553664,"threshold_uncertainty_score":0.1113849,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03373770438847958,"score_gpt":0.3100848797010593,"score_spread":0.2763471753125797,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}