{"id":"W2772940414","doi":"10.1038/s41564-017-0079-1","title":"Dietary pectic glycans are degraded by coordinated enzyme pathways in human colonic Bacteroides","year":2017,"lang":"en","type":"article","venue":"Nature Microbiology","topic":"Polysaccharides and Plant Cell Walls","field":"Agricultural and Biological Sciences","cited_by":419,"is_retracted":false,"has_abstract":false,"ca_institutions":"Agriculture and Agri-Food Canada; University of Lethbridge","funders":"Biotechnology and Biological Sciences Research Council; European Commission; Newcastle University; Diamond Light Source; Wellcome Trust","keywords":"Bacteroides thetaiotaomicron; Pectin; Polysaccharide; Glycoside hydrolase; Bacteroides; Biochemistry; Glycan; Bacteroides fragilis; Enzyme; Rhamnose; Cell wall; Biology; Bacteria; Glycosyltransferase; Chemistry; Microbiology; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009621007,0.0001744214,0.0001896999,0.0002758048,0.0001919163,0.0002542672,0.00008225154,0.0002674374,0.001207353],"category_scores_gemma":[0.00020245,0.0002023151,0.0001712509,0.0002030872,0.0001667008,0.0001144965,0.0001717529,0.0002302927,0.000225074],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002222582,"about_ca_system_score_gemma":0.0001487795,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003829432,"about_ca_topic_score_gemma":0.002932019,"domain_scores_codex":[0.9999108,0.00001445451,0.000006206132,0.0000246184,0.00001307995,0.00003081544],"domain_scores_gemma":[0.9999126,0.00001221974,0.00002004048,0.000008930013,0.00001553555,0.0000306423],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.005362136,0.00006403989,0.04592446,0.00007755674,0.00003671737,0.0009971617,0.0002278972,0.00006834457,0.9413805,0.00008002469,0.0001310918,0.005650103],"study_design_scores_gemma":[0.00009269587,0.001204718,0.8510829,0.00002013374,0.0001116214,0.003769409,0.001207511,0.0007330466,0.1400977,0.0001557159,0.001506353,0.00001807407],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9991116,0.0004814316,0.0001244059,0.00003172032,0.000003888781,0.000002609122,0.0000703691,0.000003331439,0.0001706756],"genre_scores_gemma":[0.999173,0.0001753775,0.0001032949,0.00001697618,0.000002676007,0.000003680885,0.0001175449,0.000001666591,0.0004058372],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003829432,"threshold_uncertainty_score":0.007614255,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0169584133174335,"score_gpt":0.2276040741962154,"score_spread":0.2106456608787819,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}