{"id":"W2774067396","doi":"10.1038/s41598-017-17569-7","title":"Multiple gene genealogy reveals high genetic diversity and evidence for multiple origins of Chinese Plasmopara viticola population","year":2017,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Horticultural and Viticultural Research","field":"Agricultural and Biological Sciences","cited_by":24,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University","funders":"","keywords":"Plasmopara viticola; Biology; Haplotype; Genetics; Phylogenetic tree; Population; Genetic diversity; Downy mildew; Gene; Evolutionary biology; Botany; Genotype; Medicine","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002545939,0.0001482577,0.0002765165,0.001342338,0.0004666012,0.0003502955,0.0002276067,0.0001534193,0.0006197099],"category_scores_gemma":[0.0003839404,0.0001170959,0.0002859334,0.001124155,0.0003419839,0.0001528002,0.0002355912,0.0001793976,0.00006766473],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003687406,"about_ca_system_score_gemma":0.0003227853,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.009095075,"about_ca_topic_score_gemma":0.008936396,"domain_scores_codex":[0.9998019,0.00002194569,0.00001400645,0.00008609564,0.00004065792,0.00003536898],"domain_scores_gemma":[0.9997669,0.00005000691,0.00005342329,0.00003078401,0.00003796938,0.00006090668],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002441215,0.00004871069,0.9128641,0.0000504983,0.0001929051,0.0006988892,0.002584873,0.0004472219,0.06636459,0.0003599676,0.00009782986,0.01604631],"study_design_scores_gemma":[0.000006025454,0.00003439537,0.9975523,0.000004016873,0.00004041702,0.0002945373,0.0003118699,0.000686924,0.0007403099,0.00008929473,0.0002344302,0.000005410802],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9997168,0.00003530109,0.00008252521,0.000005103421,5.165453e-7,0.000002022164,0.00002950448,0.000001465746,0.0001267711],"genre_scores_gemma":[0.9996555,0.00003880066,0.00008401051,0.000004237918,0.000001296193,0.000002985076,0.0001335838,0.000001086038,0.00007848569],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.009095075,"threshold_uncertainty_score":0.01808429,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.08542007770848234,"score_gpt":0.320658794754472,"score_spread":0.2352387170459896,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}